| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0792 |
|---|
| Symbol | |
|---|
| ID | 8806545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 846790 |
|---|
| End bp | 851337 |
|---|
| Gene Length | 4548 bp |
|---|
| Protein Length | 1515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Cobaltochelatase |
|---|
| Protein accession | YP_003460043 |
|---|
| Protein GI | 289207977 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTCT GGAAACGCGG TGTGGTTTTG CTGGTGATTG TGCTGTGGAG CGCGCCCGCC
TGGGCGGATC CCAAAATCGT CGGCATCGTC TCCGAGCGCT CGGCCCCCGA GGTGGCCGCC
GGTGCGCATC GATTCCTGGA GGCCGTGCCG GATGCCGAGG TGGTGCTGCG CACTCCGGAG
CAGCTGGCGG ACAAGTCGGA CTCGTCCGTC CAGGCGCTGT GGCGCGATGC CGACGCGGTA
CTCGTGGCAG CGGTGTTCGG GGATCAGGCC GGTCGTCTCG AACGTCTGCT GCGCGAAGAG
CCGCCGGCCG AGTCAGCGCC GATTCTCGCG ATCAATAGCG AACGGCGTCT GACTGCGCTG
TCCCGCATCG ACGGCCAGGC CGTGCTCGAC GGACTGGACG AGGAGGCCCG GACCGAACTG
GCCGAGAATC CCGAAGCGGG CGAGGATCCG CGCGAGCATC TGGCCCGGCA GCAGGAGCGC
TTCTCAAACC AGGCCGACTG GCTGACCGGA CGAGCGTTCT ATCAGGGCCG CACACCGGAG
AACATGGAGG GCCTCATCCG CTGGCTGGCT GCCCGGGGCG GGCACTCGAT CGAGGTGCCG
GAACCGGATC CGCGCGAGAC CATCCGCTAT TACCGGGATG GCCAGTCGGT CGCCGATCCG
GAGGATCTTG GCCTGGATGC CAGGCCGGCC GTGGCCGTGC TGGACCTGGA TACCGGTGAC
CGTCCTGGTG ACCGCGAGCT GCTGGATGCG ACCTGCGAGG CACTGGAGGC CCGGGATATC
CAGTGCTTCG CGGTACTCGC GCGCTGGGGT GGGGCCAGTC GCGAGGCGGT CGAGAAGCTC
GCCGCATCGG CGGCGCCCGC CGAGCTGAGC GGGATCGTCA GCCTGCAGGA CTTCGTTGTG
GGCGGCGGTG GCAACCGCGA GGCGGTGGCC GAGGCCTTCG CCGAACTGGA TGTCCCGGTG
GTCAAGGGGA TTCGCCTGGC GGACGTGAGC GAGACCGAGT GGCGGCTCTC GCACGAGGGC
ATCCCCTGGG ACAAGGTCCA CTATCATGTG GCCATGCCGG AATTGCAGGG CGCCAGCCAG
CCGATGGTGC TGGCGACGGC TGGCGAGCCC ACGCGGGACG AACGCACTGG CGTGCAACTG
GCCCTGCCCG AGCCGGTGGG CGAGCGGGTG GAGGCCCTGG CCGACCGGAT GCAGCGGTGG
GACCGGCTGC GCCAGCTGGA CAACGCAGAC AAGCGGGTCG CGGTCGTGTA CTACAACCAT
CCGCCCGGTC GCCAGAATAT CGGCGCCGAC AAGCTGGATG TCCCGGAATC GCTGCTGGAG
ATCCTGCAAC GGCTGGAGGC CGCCGGGTAT GACCTCGGGG ACGAGGTGCC GGAGGATGCC
GAGACCCTGC TGGACATGAT CCAGGACCGG GCGGTGAATC TGCCGGAACA GGCCGATGCA
CTGGACGCGA TCGCCGGCCG GGTCGCCTCG CTGGATCGCG ATCAGTACCA GGCGTATTTC
GACGGCTTGC CCGCCGCGGT GCAGGCGGAG CTGGTCGACG GACCGATCGG CTACCTGCAG
GCACGCCTGG AGGCCGCCAG GGCCGCCGAC AAGGTCGAGA TCGCGCAAGC TGGGCTGGAA
AGCGGTGTCG GTGATCTGCG CCACATGCTC GAGAGTTATC CGCACGCGGC GCAGGAGCGG
GCACTGGACC TGCTGGCCCA GTACGAGGAG GCCTGGGAGG CCACGCTGGC GGGGGAGGAC
GCGCACGCGA CCACCGAGCA GTTGCGCAAG GCGCTGGTGC GCACGGGCAT CCCCGGCCTG
ACCGGCTGGG GCGAGCCGCC GGGCGAGGCG ATGACCCGCG ACGGCGAGAT GTTGTTCCCG
GGGATCGAGT TCGGCAATGT GTTCATCGGC CCGCAGCCGC CGCGCGGCTG GGAGGTCAGC
GAGCGCCTGC TGCACGCGAA TACCACGTTC CCGCCGACCC ACCAGTATGT CGGCTTCTAC
CACTGGATCC GCGATCACTT CGAGGCGGAC GCGCTGGTCT ACGTCGGCCG CCACTCGACC
CGCGAATTCC TGCCGCGCCG GCGCGCGGGG CTGGCACCGG ATGATTACCC CGAGCTCCTT
GGCGGGGCTT TGCCGATCAT CTATCCCTAC ATTGTCGATG GCGTGGGTGA GGGCATCCAG
GCCAAGCGCC GCGCCATGGG CGTGATGATC AGCCACCTGA CCCCGCCGCT GGCGGCCACC
GAGCTCTACG ACAGCCTGCT GGAACTGCGC CAGCTGGTGG AGACCTACGA GGCCGCCGCG
CAGCCGGATG CCGCGACGCG CTCGCGGGCA GTCCAGACCC TGCGCGAACG CATCGATGAG
CTCGGCCTGA CCGAAACCAT CGAGCGTGAA CTGGCGCGGG GTCACCATCA CGATCACGGG
CATCACCATG ATGGTCACGG TGATCATCAC GAGGGGCATC AGGACGAGGA CCACGCGGGA
CATGGCGAAG ACCACGGAGC CGAACACGGC GACGAACATC GCGACGCGGT CCATCACCGG
GAACACGGGG ATGCAGAGCA CGAGCATGCC CATGAGCATG ACCACGCGGA CGAGCATGCG
GATGAGGGTC ATGACGAACC CACACCGACC GCGCTGGCGG AGATGGACGA GGAGTTGCTG
GTCCACGAGA TCGGGCATTA CCTGACCGAC ATGCAGGAAG ACCAGATGCC GCTGGGGCTG
CATGTGTTCG GACGCGACTG GAGCGACGAG GCTGTGGACA CGATGCTCGA GTCGATGGCG
GGTGACGACG CGGTCGACGA CGACTGGGAT GCGAAGCTGC GTGGATCCCC GGCCAGCGAG
CGTGCGCATC TGCTGGCGGC GCTCGAAGGC CGTTTCGTGC CGCCAGGGCA GGGCAATGAC
CCGATCCGTA CGCCGGAGGT GTTGCCGACC GGGCGCAACT TCCACGCGCT GGCGGCGGAC
CTGGTCCCCA CGCGTATCGC CTGGGGTATC GGTCAGGAAC TGGCCGCGGA TGCCCGCGAG
CACGGCGATC CCGAGGCGGA TGGCAGCGAG GCGATCATCC TCTGGGCGTC AGACACTGTG
CGCGACGAGG GCGTGATGAT CGCCTTTGGC ATGGACATGC TGGGCATTCG TCCGGCCTGG
AACAGTCGCG GGATCGTCCA GGGGCTGGAG CGCATGGACC TTGATGAAGC CGGGCGCGAT
CGACGTCGCG ATGCCCTGTT TACCACCTCC GGTCTGTTCC GCGACCTCTA CGAGGACCAG
CTGGTGTGGC TAGACCGGGC CGCGCGCCTC GCGCTGGACG GATCGTCCGA GACCATTCTT
GCCGAGTACC CCGAGCTGGA AGAGGCACTG GAAGCGGCGT TGGCCCCGCT GGGGCAAGAC
CTGCGCGATC CGGGCACCGA GCCCCTGGCG CGCAACGATG TGGCCGCCCA ATGGGTGGAG
GACACCCAGG CCCTGCGCGC CGCAGGCCTC AATGGCCTCG AGGCGGGTCA GCAGGCCGCG
CTGCGGGTGT TCGGTACCGC CCCCGGGGCC TATGGGGCCG GGGTCAATCG TCTCGCGGAC
CGTTCCGGGG CCTGGGAGGA TCGTGCCGAA CTGGGGGCGG CCTATCTGCG CCGGATGGGG
CATGCCTATG GCGCGGATGA GTCCGGTGGC TCCGCACACG AGGCCTTCGA GGCCCGGCTG
GGCCAGGTCG GGCGGACCTA CCTTGGGCGC GCCTCGCACC TCTACGGCCT GCTGGACAAC
GACGACGGCT TTGATTTCCA GGGTGGTCTG TCGACCGCGG TCGAGCGCAT TCGCGGCGAG
GTGCCGGACA ACCGCGTGCT GCAGCATGCC GACCCGGACG ACCCGCGGGT GGAAACGCTC
GGCCGCGCGC TGATGCGCGA GCTGCAGGGG CAGAACCTGA ATCCGCAGTG GATCGAGCCG
CTGATGGATC ACGGCTATGC CGGGGCCCGC ACCATGACCC GGGACTTCGT CGACAACCTG
TGGGGCTGGC AGGTGACCAA CCCGGAGGTC ATCCGCTCCT GGGTCTGGGA CGAGGTGCAC
GACGTGTATC TGCAGGACCG CCACGGACTG GGCCTGGACG ACTTCCTGGC CGATGGCCAC
AACGTGCACG TGAAGACACA CCTGCAGGCC GTGCACTTGG TCGCGGCCAG TCACGGGTTC
TGGGAGGCCG ATCCGGAGGT GCTGGAGGCC TTGTCCGAGC GCTTCGCGGA ACTGGTCGCC
GAACACGGCC TGCCCGGCAG CGGCCACACG CGCCCCGATC ACCCCATGCT GGACGAGGTG
GCCGAGCGCC TGGACGACGC CGATCTGCGC GAGGCCTTTG ACGCCGTGCG CGCGGCCGCG
CAAATCGAGC GGGCGGAGCC CGAAGCCGAC CCCAACCGTG TCACCGAGAT CCAGCCGCTG
GAAGACCCGA CGGCACAAGA GATGCAGGAG ATCCCCGAGC CGGCCGAGGC CGACGGCGGC
CAGGAAACCG GTGACGAGGC GGCGGGCATG CCCTGGCTCC CCTGGCTGGT CGCCGCTGCG
CTGTTCCTGC TGCTGCTCGG CGGCATTGCC GTGGGCCGAC GGCGATAA
|
|---|
| Protein sequence | MSFWKRGVVL LVIVLWSAPA WADPKIVGIV SERSAPEVAA GAHRFLEAVP DAEVVLRTPE
QLADKSDSSV QALWRDADAV LVAAVFGDQA GRLERLLREE PPAESAPILA INSERRLTAL
SRIDGQAVLD GLDEEARTEL AENPEAGEDP REHLARQQER FSNQADWLTG RAFYQGRTPE
NMEGLIRWLA ARGGHSIEVP EPDPRETIRY YRDGQSVADP EDLGLDARPA VAVLDLDTGD
RPGDRELLDA TCEALEARDI QCFAVLARWG GASREAVEKL AASAAPAELS GIVSLQDFVV
GGGGNREAVA EAFAELDVPV VKGIRLADVS ETEWRLSHEG IPWDKVHYHV AMPELQGASQ
PMVLATAGEP TRDERTGVQL ALPEPVGERV EALADRMQRW DRLRQLDNAD KRVAVVYYNH
PPGRQNIGAD KLDVPESLLE ILQRLEAAGY DLGDEVPEDA ETLLDMIQDR AVNLPEQADA
LDAIAGRVAS LDRDQYQAYF DGLPAAVQAE LVDGPIGYLQ ARLEAARAAD KVEIAQAGLE
SGVGDLRHML ESYPHAAQER ALDLLAQYEE AWEATLAGED AHATTEQLRK ALVRTGIPGL
TGWGEPPGEA MTRDGEMLFP GIEFGNVFIG PQPPRGWEVS ERLLHANTTF PPTHQYVGFY
HWIRDHFEAD ALVYVGRHST REFLPRRRAG LAPDDYPELL GGALPIIYPY IVDGVGEGIQ
AKRRAMGVMI SHLTPPLAAT ELYDSLLELR QLVETYEAAA QPDAATRSRA VQTLRERIDE
LGLTETIERE LARGHHHDHG HHHDGHGDHH EGHQDEDHAG HGEDHGAEHG DEHRDAVHHR
EHGDAEHEHA HEHDHADEHA DEGHDEPTPT ALAEMDEELL VHEIGHYLTD MQEDQMPLGL
HVFGRDWSDE AVDTMLESMA GDDAVDDDWD AKLRGSPASE RAHLLAALEG RFVPPGQGND
PIRTPEVLPT GRNFHALAAD LVPTRIAWGI GQELAADARE HGDPEADGSE AIILWASDTV
RDEGVMIAFG MDMLGIRPAW NSRGIVQGLE RMDLDEAGRD RRRDALFTTS GLFRDLYEDQ
LVWLDRAARL ALDGSSETIL AEYPELEEAL EAALAPLGQD LRDPGTEPLA RNDVAAQWVE
DTQALRAAGL NGLEAGQQAA LRVFGTAPGA YGAGVNRLAD RSGAWEDRAE LGAAYLRRMG
HAYGADESGG SAHEAFEARL GQVGRTYLGR ASHLYGLLDN DDGFDFQGGL STAVERIRGE
VPDNRVLQHA DPDDPRVETL GRALMRELQG QNLNPQWIEP LMDHGYAGAR TMTRDFVDNL
WGWQVTNPEV IRSWVWDEVH DVYLQDRHGL GLDDFLADGH NVHVKTHLQA VHLVAASHGF
WEADPEVLEA LSERFAELVA EHGLPGSGHT RPDHPMLDEV AERLDDADLR EAFDAVRAAA
QIERAEPEAD PNRVTEIQPL EDPTAQEMQE IPEPAEADGG QETGDEAAGM PWLPWLVAAA
LFLLLLGGIA VGRRR
|
|---|
| |