Gene TDE2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2727 
Symbol 
ID2740946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2784341 
End bp2785435 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content35% 
IMG OID637161624 
ProductGTPase YjeQ, putative 
Protein accessionNP_973325 
Protein GI42528227 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAA TTTTAAATTT CGGCTTTGAA GATTTTTTTA AGGATAAAAA GATCGAAAAA 
GAGGTTGGGC GTATTATTTT TTTTGGCGGG ACTTCCTATA AAATAATATG TAAAGATGTC 
GAAAAAGAAG CCCGCTTAAA AGGCTCTTTT AAAAAAGAAT GCGAAATATC CGGTTATTAT 
CCTACGGTAG GAGACTGGAT CGGTTTTGAA TCTCAAGAAA ATTCTTCGAT TGCACTTATA 
GATTTTTTAT ATGAGCGCAA AAATAAGATT TCGCGAACGG ATCCTAGGTT AGGCATTGAG 
CTTGAACAAA TTATTGCTGC CAATATTGAT ACAGCTTTTA TATGTATGTC CTTAAACAAG 
GATTCTAATT TAAACCGCTT GGCTCGATAT GTTTTTGCTT TGCAAAATAT TGAAACCGTT 
TTGCTTTTGA CTAAGGCGGA CTTATCTGAA ACAAGGGAGG ATGCCGAAAA TTTAATAAAA 
AAGATTTATC CTCATTTAAA AGTCTATTGC ATAAGTATTT TTGAACCTGA CAGTTTAGAA 
AATATAAAGT ATTACTTTAA AAAGGGAAAG ACTTCGGTAT TGCTCGGTTC TTCCGGTGTT 
GGAAAATCAA GCCTCATAAA CAGCCTAACC GGAAAAGAAA TTTTACGCAC AAGCGAAATA 
AATAAAAAGA TAGACAAGGG CGTTCATACT ACAACGAACC GGCAGATAAT TTCTTTAGGA 
GAAGATGCGG GAGTTATAAT GGACACTCCC GGAATGAAGG TTCTGGGTAT CTGGGATTCG 
GACAGCGGGG AAAATTCTTT TGCGGATATT ACCGAGCTAA AATCCAAGTG TCTTTTTAGC 
GACTGTACGC ATACATGCGA AAAAGGCTGT GCCGTTTTAG AGGCTCTTAA AACGGGTTTG 
TTGGATAAAA ACAGGTATGA ACTTTACCTG CAATTATTAA AAGAGGATAG AATAAAAATA 
AGACGGGAAA AACGGCAGGA AAAATTCTTA ATAAAGAAGG AAGAAAAGTC CAAGTCGGCA 
AAAAGGCGCT TTAAAGAAAA GAAAAACATA AAACAAACCT TTAAAAAAGA TTTGGATGAC 
CTGCTTGATG AATAA
 
Protein sequence
METILNFGFE DFFKDKKIEK EVGRIIFFGG TSYKIICKDV EKEARLKGSF KKECEISGYY 
PTVGDWIGFE SQENSSIALI DFLYERKNKI SRTDPRLGIE LEQIIAANID TAFICMSLNK 
DSNLNRLARY VFALQNIETV LLLTKADLSE TREDAENLIK KIYPHLKVYC ISIFEPDSLE 
NIKYYFKKGK TSVLLGSSGV GKSSLINSLT GKEILRTSEI NKKIDKGVHT TTNRQIISLG 
EDAGVIMDTP GMKVLGIWDS DSGENSFADI TELKSKCLFS DCTHTCEKGC AVLEALKTGL 
LDKNRYELYL QLLKEDRIKI RREKRQEKFL IKKEEKSKSA KRRFKEKKNI KQTFKKDLDD 
LLDE