| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2716 |
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| Symbol | |
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| ID | 2740935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2773335 |
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| End bp | 2773991 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637161613 |
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| Product | HAD family hydrolase |
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| Protein accession | NP_973314 |
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| Protein GI | 42528216 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000772309 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CATGTATTTT TGATTTGGAC GGGACCTTAA CCAACTCCCT TTATTCGATA
GCTCATTTTT TAAATGCTGA AACAGCAAAA TACGGTATAC CGCCTGTAGA TGCGGAAGAA
TTTAAAATCT TAACAGGCAA CGGTGCGAGA AAACTTGTAC AAAGAGTTCT TGAACGTGCA
GGAAAAAACG ATAAAGATTT GGAAGAAAAA ATTCTTACAG AATATAATGC CGCCTATGAT
GCCGATCCCG TTTATCTATG CGAGGCCTAT CCGGGAATTA AAAAGCTTTT AGCGGATTTA
ATAAAAAACG GAATTTCCGT AAATGTGCTT TCAAACAAGC CTCATCCCAC AACAGAAAAG
GTTGTTAAGA CAATCTTCGG CGAGAACACT TTTTCATGTA TCTTAGGAGC CCGGGATTCG
GTGGCCTTAA AACCTGACCC TGCAGGTGTC TACGAAATTT TAAAAATGCT CAAGCTCGAA
AAAAAAGACT TTCTTTACAT AGGAGACACG GCAACGGATG TTCAAACCGG AAAAAATGCA
GGCCTTTTTA CAATCGGTGT TTTATGGGGT TTTAGAAAAC GCCCTGAATT GGAACAAGCC
GGAGCTGATG CAATAATCTC AAGCCCTGAA GAAATCCTAA AGATAGCCTT AGGCTAA
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| Protein sequence | MKKACIFDLD GTLTNSLYSI AHFLNAETAK YGIPPVDAEE FKILTGNGAR KLVQRVLERA
GKNDKDLEEK ILTEYNAAYD ADPVYLCEAY PGIKKLLADL IKNGISVNVL SNKPHPTTEK
VVKTIFGENT FSCILGARDS VALKPDPAGV YEILKMLKLE KKDFLYIGDT ATDVQTGKNA
GLFTIGVLWG FRKRPELEQA GADAIISSPE EILKIALG
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