| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2695 |
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| Symbol | |
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| ID | 2739282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2736464 |
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| End bp | 2739169 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637161592 |
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| Product | transcript cleavage factor/unknown domain fusion protein |
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| Protein accession | NP_973293 |
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| Protein GI | 42528195 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1747] Uncharacterized N-terminal domain of the transcription elongation factor GreA |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01462] transcription elongation factor GreA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000565329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATA TACAGAAACA ACTGATAGAG ATGCTCAATG AAGAAAAATG GACCAGAGCA
GCTATAGGCA ACTACACAAC AAAGAATTTT GAAGATCTAT ATAAATTAGT ATCTACAGCA
AAAAAAGAAA ATGTTGTGGA TGAAATCAAA CAAATATGTG ATGAACATTT AACACATACA
AAAAACAGTA TAATAGCTCT TTATATTTCA AGTATAATTT CTCTTTCAAA TCAGCTTTTG
GATGATTCAA ATGTTGTAAG CCTAATCGGA ATATTTACCG ACAACCACAG AACACAAATA
GTTGAATATC TTTGTAAAAA GGTTCTCGAA TACGGAGAAT CCAAATTTGC CCTCCGTACA
TTGGCTGAAT GCTATAAGGC TGCAGGGAGT GAAGACCTTT ATGATATTTG GGAACGCCTG
GTTAAGGTTG ATTATGATGA AGCCGAGGTT GCCAAACTTT TAGCCGAAAA ATATGAAAAA
GACGGAAACA CGGAAAAATC TATAGAATAT TATAAAAAAG CCTTGTACCG CTTTATAAAC
CGCAAGCAAA TAAACGGTGT AAAAGAAATA TGGTCAAAAC TTGTCACCTT AATCCCTGAT
GAGATTGACT TTTTCTTCCG TATACAGGCT AAGATTACAG GTGTCATGGA TAACAGCCGC
AATTCCATAT TGATGCAGGA TGTTTACCAA TATTACAGGG GAAATGAAAA CTGGAATATT
TGTATCGATA TTTTAAAGCT TATTCTTTCT TATGATGAAA AAGATAACTG GGCAAGGGAA
GAAATTATCG AATGCTTTAA AAATAAGTAC AAAGATCACA GCCAGCTTGC AGAATGTATT
AAGGTTTCGG ACTTGAGTCA GCCTTGGCGC CCCGTATTTG ATGCTATTGC CGACTTTGAA
AAACATATTT CCTTTGATAC GGGTTCCTTT GTCTTCCACC GCACATGGGG TGTAGGACGC
ATTGCTTCAA TTAAAGATGA TGACCTGGTT ATAGACTTTG CAAAAAAACG AGGTCACAGT
ATGAGTCTCA AAATGGGTAT TACCGCCCTC CAAACCTTGG ATAGGGAACA TATCTGGGTA
TTAAAATCTA CGGTCAGCAA GGAAATTCTT ACAAAAAAAA TAAAGAGTGA TCCCGAATGG
GCATTGAAGA CTATAATAAA GAGTTTTGAC AATAACTGCG ACATGAAAAG GATTAAGCAG
GAACTTGTTC CGTCACTTTT AACGGCAGGT GAATGGACCA GCTGGAATAC GAAGGCTAGA
AAGGTCTTAA AAGAAAATCC AATGTTCGGT ATCAATCCTG ATAATATAGA CTTTTACAGC
GTAAGAGAGC GTCCCATTGC CGCCGAAGAA AAGCTTTCAA ACGAATTTAA GGCTCAAAAG
AACTTTTTTG CCAGAATTGA ACTTCTTAAT GCCTATGATG CCTCGGAGGC TTGCGATGAC
GAATCCGATA CCTTCCGCGA AATGCTTGAT TATTTTGAAG GCTTCCTAAA AGCCTTCAGT
CAGGTAAATG AGCTGGTTAT TTGTGCCTAT ATTCTTGTTA AAGAATTTAT TGCAGACAAG
CAACAGATCT CGGCCGTAAA GCAATATAAT TTTGCAGAGC TTTACAGCCG TATTGAAGAT
CCGATGGAGG TATATTCTCA AATAAAGGAT AAGGTTTCGA TAAAGGGGCA GACCCTTCGA
CAGAAATTCT TAAAGTACAT AAAAAATCTT ATTCCCAATT GGGAAAAAGA ATATATCAGA
CTATTCCCCA CGGTTTTATC TTCCGAAATC TTGGATGCTC TGATAGAAGC CGGCTCTACC
GATGATGTAA AGAATTTGGT AAAGGATTGC TTTGAAAACT ACCGCATATA CAGAAGTGCC
GTTATTTGGT TCTTTAAAAA TATTCAGGAA GAAGAATGGT TTAAGGAACT CGGTATCAGC
GTAGAGCAGC AGCTCATAGT GCTTATTCAT ATTCTTGATA TTACATACCG GGAAATTGCA
TCGAGAAGAA ATACAACCGA AAACCGAAAG ATCAATCATC AAGTACATAC AATCCTATTC
GGAAAGGATG AGCTTTTACA AAACTTTATA ATGGAAAGCG ATGTAGATAC AATAACCAGG
CTTTATACCC TTATCGATGA TATAAAAGAT CTTGATCCGG TAATTAAGAT GAATATTAGA
GCTAAAATTG TTGAAAAGCA TAAGGACTTT AAATTCTTTG ATATTGAAGA AAAGACTGTT
ACGGTTCACG GCTTGATCGT TACGGCAAAG ATGCTCGATC TTAAAAACAA AGAGCTTATC
GAAATCAGGG ATGTTAAAAT TCCGCAAAAT GCAAAGGATA TCGGTTTTGC TCTTTCGCTC
GGAGACTTGC GGGAAAATGC CGAATATAAG GCTGCAAAAG AAGAACAAAC CCGCTTAGGA
AATGCCTTAA CCCGATTACA GGATGAACTT GATAGAGCTC AGATTTTTGA TCCTACAACT
GCTACTGCAA AGAAGGTTTA CTTCGGCAGT AAGGTAAAAA TTCTAAACAA TTTGACAAAT
CAAGAAGAAG AGTATACAAT TTTAGGACCG TGGGAATCGG ATCCCGCAAA CGGAATAATT
TCTTATATGT CTCCCTTAGG AAACGGATTG TTTAACCATA AAAAAGGAGA AGAGGTTGAA
TTTGAAGTAA ATGACGAAAA AAGGAGCTAT AAGATTATAG ATATTTCTAT CGCGGATTTG
AAATAA
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| Protein sequence | MADIQKQLIE MLNEEKWTRA AIGNYTTKNF EDLYKLVSTA KKENVVDEIK QICDEHLTHT
KNSIIALYIS SIISLSNQLL DDSNVVSLIG IFTDNHRTQI VEYLCKKVLE YGESKFALRT
LAECYKAAGS EDLYDIWERL VKVDYDEAEV AKLLAEKYEK DGNTEKSIEY YKKALYRFIN
RKQINGVKEI WSKLVTLIPD EIDFFFRIQA KITGVMDNSR NSILMQDVYQ YYRGNENWNI
CIDILKLILS YDEKDNWARE EIIECFKNKY KDHSQLAECI KVSDLSQPWR PVFDAIADFE
KHISFDTGSF VFHRTWGVGR IASIKDDDLV IDFAKKRGHS MSLKMGITAL QTLDREHIWV
LKSTVSKEIL TKKIKSDPEW ALKTIIKSFD NNCDMKRIKQ ELVPSLLTAG EWTSWNTKAR
KVLKENPMFG INPDNIDFYS VRERPIAAEE KLSNEFKAQK NFFARIELLN AYDASEACDD
ESDTFREMLD YFEGFLKAFS QVNELVICAY ILVKEFIADK QQISAVKQYN FAELYSRIED
PMEVYSQIKD KVSIKGQTLR QKFLKYIKNL IPNWEKEYIR LFPTVLSSEI LDALIEAGST
DDVKNLVKDC FENYRIYRSA VIWFFKNIQE EEWFKELGIS VEQQLIVLIH ILDITYREIA
SRRNTTENRK INHQVHTILF GKDELLQNFI MESDVDTITR LYTLIDDIKD LDPVIKMNIR
AKIVEKHKDF KFFDIEEKTV TVHGLIVTAK MLDLKNKELI EIRDVKIPQN AKDIGFALSL
GDLRENAEYK AAKEEQTRLG NALTRLQDEL DRAQIFDPTT ATAKKVYFGS KVKILNNLTN
QEEEYTILGP WESDPANGII SYMSPLGNGL FNHKKGEEVE FEVNDEKRSY KIIDISIADL
K
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