Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2626 |
Symbol | |
ID | 2740800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2666747 |
End bp | 2668492 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637161522 |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | NP_973224 |
Protein GI | 42528126 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0381591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA AAGAAAAAAG TCCTTCGCCT ATCGCGTGGG CGTTGGGACA AACAGGGGAA CACAAGGGGC AATATGTTCT GAGTGTTATC CTCGCAGTCA TCGGTGTGGC CTTTTCCATC GCACCGTATT TTGTTGTTGC CGGCATCGTA CACGGTTTGA TGAGCGGAAA CAAAGACCTT TCGTATTATA TGATACGTTG TCTGATTATT GCAGCGTTTT GGTTTTGCCG TGTACTGTTT CATGCGCTTA GCACATCGAC AAGTCATAGA GCAACGTTTG CAGTGCTCGG GGAAATCCGA AAACGATGCA CGGAAAAACT GACAAGAATG CCTCTGGGTG CGGTGTTGGA GCAAAGTTCC GGAGCGCTCA AAAATATACT CATCGAACGT ATCGACAGCA TTGAAACAAC ACTGGCGCAT ATCGTTCCGG AGTTCACCGC AAATTTACTG ATCCCCGTCA TCATTTTGAT CTATATTTTT ACCATTGACT GGCGTATGGG GCTGGCTTCT CTTGCAACGA TACCGGTGGG CTTTTTCTGT TACGGTCTTA TGATGAAGGG CAGTCCTCAA TTCTATCAAC GCACGGTTAC AGCCACAAAG GCGCTCAATG ATACGGCGGT TGAATATATC GGCGGTATTC AAGTCATCAA GGTTTTCGGG AATACAAAAA GTTCCTACGA CCGCTTCGTG CATGACGCCT ATGAAGCCGC TCACAGCTAT ATCGATTGGA TGCGCTCCTG TATTCTCACC TTTACATTCG CCACGGTAAT CATGCCCGCT ACAATGGTTT CCGTGCTCCC CATCGGCGGT CTTTTGGTAA AGGGAGGATA TCTTTCTCCG CAGAATCTCG TAACAATTAT TATTCTGTCC GTCGGCATCA TCACACCGCT TATAACCTTG ATGAGTTATT CGGACGACTT TCGAACCATG GGAACCATCT TCGGTGAAGT TCAAAGTATT CTGTATGCTC CCGAAATGGA GCGCCCGTTA GACGGAGCTA TTCCAAAAGA AAACACATTG AAGCTGCAGG ATGTTCGTTT TTCGTATAAG GAAAAGGAAG TGCTTCATGG CATTTCTATG GAAATCCCGG AGGGCAGCTT TATTGCGCTG GTCGGTCCTT CCGGCAGCGG AAAGAGTACC ATTGCGCGCC TTATCGCTTC GCTCTGGGAT GTGAGCAGCG GGAAAATTTT GCTGGAGGAT ACGGACATTC GTGAAATTCC GCAAGAGGCC TATTCGGATA AGATCGCCTT TGTCTCGCAG GATAATTATC TATTCAATAT GACGGTCAGA GAAAATATCC GCATTGGGCG AGCGGATGCA ACGGATGCGG AAGTGGAGGA AGCGGCAAGA CAAAGCGGTT GCCATGAATT CATTTTGGAA CTGGAGCACG GTTACGATAC CGTGGTAGGC ACTTCCGGCG GGCATCTTTC CGGCGGTGAG CGGCAGCGTA TCTCCATTGC AAGAGCAATG CTGAAAGCGG CACCTATTAT CATTTTGGAT GAGGCAACCG CCTACACCGA TCCTGAAAAC GAAGCGGTTA TTCAGCGCTC TATCTCTAAG CTGACGGAGG GGAAGACGCT CATCGTGATT GCGCACCGGC TTTCGACGGT CTCCTCTGCG GATTGTATTT ATGTCATTAA AGACGGCACC GTTGCAGACA GCGGAACCCA TGATGAGCTT CTTTCTCATC ACGGCTTATA TGAAACGATG TGGAATGCAC ATATGGAGGT GAAAGATCAT GCTTAA
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Protein sequence | MKEKEKSPSP IAWALGQTGE HKGQYVLSVI LAVIGVAFSI APYFVVAGIV HGLMSGNKDL SYYMIRCLII AAFWFCRVLF HALSTSTSHR ATFAVLGEIR KRCTEKLTRM PLGAVLEQSS GALKNILIER IDSIETTLAH IVPEFTANLL IPVIILIYIF TIDWRMGLAS LATIPVGFFC YGLMMKGSPQ FYQRTVTATK ALNDTAVEYI GGIQVIKVFG NTKSSYDRFV HDAYEAAHSY IDWMRSCILT FTFATVIMPA TMVSVLPIGG LLVKGGYLSP QNLVTIIILS VGIITPLITL MSYSDDFRTM GTIFGEVQSI LYAPEMERPL DGAIPKENTL KLQDVRFSYK EKEVLHGISM EIPEGSFIAL VGPSGSGKST IARLIASLWD VSSGKILLED TDIREIPQEA YSDKIAFVSQ DNYLFNMTVR ENIRIGRADA TDAEVEEAAR QSGCHEFILE LEHGYDTVVG TSGGHLSGGE RQRISIARAM LKAAPIIILD EATAYTDPEN EAVIQRSISK LTEGKTLIVI AHRLSTVSSA DCIYVIKDGT VADSGTHDEL LSHHGLYETM WNAHMEVKDH A
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