Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2570 |
Symbol | rnhA |
ID | 2739935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2597515 |
End bp | 2597997 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637161463 |
Product | ribonuclease HI |
Protein accession | NP_973168 |
Protein GI | 42528070 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000396954 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTG AAATATACAC GGATGGAGCC TGCTCCAAAA ATCCCGGCCC CGGAGGATGG GCCTACATAA TGGTAAACAA AGATTCAAAA GAAGAAATAT GCAGAGAAAA CGGGGGCGAA AAATCTACTA CCAATAACCG CATGGAACTC ATGGCTGTTA TAAGGGCCTT AAAAAAGATA AAAGAGGGAG CAGCATCCTT GGCAGACAAG TCCGGCAAAG CCTTGGACTA TAAAAGCATT TCGGTACACA CCGATTCTCA ATATGTGCAG CAGGGCATAA GCTCGTGGAT CTTTAACTGG AAAAAAAATA ATTGGAAGAC GGCCTCCAAA CAGCCCGTAA AAAACCAAGA CCTTTGGCAA GAGCTGGATT CCCTTTCAGC CTCGATTAAG CCTGAATGGA TTTGGGTAAA AGGCCACGCA GGAAATCCCT TAAACGAAGC CTGCGATCGC CTTGCAGTTG AAGCCTGCCA AAAAATGATG TAA
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Protein sequence | MNIEIYTDGA CSKNPGPGGW AYIMVNKDSK EEICRENGGE KSTTNNRMEL MAVIRALKKI KEGAASLADK SGKALDYKSI SVHTDSQYVQ QGISSWIFNW KKNNWKTASK QPVKNQDLWQ ELDSLSASIK PEWIWVKGHA GNPLNEACDR LAVEACQKMM
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