Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2401 |
Symbol | |
ID | 2740703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2426646 |
End bp | 2427782 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637161292 |
Product | hypothetical protein |
Protein accession | NP_973000 |
Protein GI | 42527902 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.278357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA GAAAAATTTT GGTTACCGGT TCACTCGGAC AGATCGGAAG TGAATTGGTT ATGTTTTTAA GAAAAGAGTA CGGAAACGAC AATGTTATAG CTTCCGATAT CGAAAAAAAA GATGTACCCA AGGTTATCGG AAGCGGTCCC TTTGAAAAGC TCGATGTCCT TGACGGCAAA AAAACTCTTG AGGTTTGCAA AAAATATAAG GTCAACACGA TCATCCACCT TGCAGCCCTT CTTTCAGCCG TTGCCGAAAA AAATCCTCAA TTAGCCTATC AGATTAACCT TACAGGTTTA CACAATATGT TGGAACTTTC ACGAGAACAA AAATATTCTC TTTTTGTACC CAGCTCAATC GCAGCCTTCG GCCCCTCGAC CCCTGCCGAT AAGACTCCGC AGGATACAAT TCAGAGGCCT ACCTCAATGT ACGGTGTTAC AAAGGTTGCC GGAGAACTTT TGTGCGATTA CTATCACCAA AAATTCGGCG TAGACACAAG AGGTGTACGC TTCCCCGGCC TTATCTCCTA TGAGGCCCTC CCCGGCGGCG GAACAACCGA CTATGCCGTT CATATCTACT ATGAAGCCTT AAAAAAAGGA GCCTATACTT CCTTTATCAA AAAAGGAACC CTTATGGACA TGATGTACAT GCCCGATGCA TTAAACGCTA TCTTTAAACT TCTTGAAGCA GACCCTGCAA AATTAAAACA CAGAAACGCC TTTAATATCA CGGCTATGAG CTTTGCTCCC GAAACGATAG CTGCAGAAAT CAAAAAGCAT ATACCCAAAT TTAAGATGAG CTATGATGTC GATCCCGTAC GTCAGGCTAT AGCAGATTCT TGGCCTAACT CCCTCGATGA TTCTTGTGCC AAAAAAGAAT GGGGTTGGAA GCCCAAGTAC AACCTTGAAA GCATGACAAA GGATATGCTC GAAAAATTGA GCGAAAAACT CGGAATCGAG CTTCCGAATG CAAAACCTGC CGCAGTAAAG GTAAGCACAG CTAAGGCTCC TGCCGCTAAA AAACCGGCAA AGTCTGCGAA GCCTACTAAA ACAGTGAAGC CGGCAGAAAA GGCTCCCAAG GCAGCAGCAA AGAAACCGGC AGCCAAACCT TCTAAGGGAA CTGAAAAAAA GAAGTAA
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Protein sequence | MTKRKILVTG SLGQIGSELV MFLRKEYGND NVIASDIEKK DVPKVIGSGP FEKLDVLDGK KTLEVCKKYK VNTIIHLAAL LSAVAEKNPQ LAYQINLTGL HNMLELSREQ KYSLFVPSSI AAFGPSTPAD KTPQDTIQRP TSMYGVTKVA GELLCDYYHQ KFGVDTRGVR FPGLISYEAL PGGGTTDYAV HIYYEALKKG AYTSFIKKGT LMDMMYMPDA LNAIFKLLEA DPAKLKHRNA FNITAMSFAP ETIAAEIKKH IPKFKMSYDV DPVRQAIADS WPNSLDDSCA KKEWGWKPKY NLESMTKDML EKLSEKLGIE LPNAKPAAVK VSTAKAPAAK KPAKSAKPTK TVKPAEKAPK AAAKKPAAKP SKGTEKKK
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