Gene TDE2385 details

Gene Information

• Locus tag: TDE2385
• Symbol: ddl
• ID: 2740687
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 2414439
• End bp: 2415545
• Gene Length: 1107 bp
• Protein Length: 368 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637161276
• Product: D-alanyl-alanine synthetase A
• Protein accession: NP_972984
• Protein GI: 42527886
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes
• TIGRFAM ID: [TIGR01205] D-alanine--D-alanine ligase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATAG CAATCATTTA CGGCGGAAAG TCAAGCGAAC ATGAGGTTTC CCTACAGTCG 
GCATCATCGA TTATAAGGAC AATAGATAAA AAGCACAAAC TTCACCTAAT CGGTATTTCC 
AAAAACGGAG CATGGTATTT ACATGGAGAT GAAGAAAGAG AAAGGATTAT AAAAAACGAA 
AAGGCCGTTT TAAAAATAAA AAAAGATGAG GCAAAGCGAG TAACCGTAAT TCCCGGAGGC 
GGCGCAAAAA AAGGTTTAAA AGCAGGAGAC GAGTTTTTAC CGACTGATGC GGTCTTTGCC 
GTTTTACACG GAAGATTCGG AGAAGACGGC ACAATTCAAG GTCTTTTTGA AATGGCCGAC 
CTACCCTATG TAGGGGGCGA TGTAATGTCC ACAAGCATCT CGATGGATAA GGAAAAAACC 
AAGATGATTT GGGATTATTC GGGCCTTCCC ATTGTACCCT ATATAGCAAT CAAAAGGCAG 
GACTGGGATG ATCCTGAAAA GAAAAAAGCA ATCTTAGCAA GGGCCGAAAA GGACTTGGAA 
TATCCTCTCT TTATAAAACC GTGCAGGGCA GGAAGCTCCG TAGGCGCCGG AATGGTAAAA 
AACAGAAACG AACTTTTAGA GCAGGCAGAA GAATCTTTTT TATGGGATAA TAAAATTTTA 
GTCGAAGCAT GTATTGAGGC CAGAGAAGTA GAATGTTCGG TTACGGGAAA CACAAAAACT 
GTTGCCTACA TTCCGGGAGA AATAATTCCG ACCCATAAAT TTTATGACTA CGAAGCAAAA 
TACACGGATC CGAACGGAGC CGAATTAAAG ATTCCGGCCG ATTTAAATGA AACTCAAAGA 
AAGACAATCA GAGAAACCGC TATCAAGGCC TATGAAGCCT TGGATCTATC AGGCCTTTCC 
CGCGTGGATT TTTTTATCGA CAAAAGAACC GGCAAGATAT ACTTAAACGA GGTAAACACT 
ATTCCGGGCT TTACCGCGAT TTCGATGTTC CCTAAAATGT GCGGAGCTTC GGGTCTTCCA 
TATAACGAGC TTATAATGCA CTTAATAGAG CTTGCAATAG ATAGATTTAA GACAGACAGA 
AAACTCAAAA CCTGCCGTCA ATCTTAA 

 

Protein sequence

MNIAIIYGGK SSEHEVSLQS ASSIIRTIDK KHKLHLIGIS KNGAWYLHGD EERERIIKNE 
KAVLKIKKDE AKRVTVIPGG GAKKGLKAGD EFLPTDAVFA VLHGRFGEDG TIQGLFEMAD 
LPYVGGDVMS TSISMDKEKT KMIWDYSGLP IVPYIAIKRQ DWDDPEKKKA ILARAEKDLE 
YPLFIKPCRA GSSVGAGMVK NRNELLEQAE ESFLWDNKIL VEACIEAREV ECSVTGNTKT 
VAYIPGEIIP THKFYDYEAK YTDPNGAELK IPADLNETQR KTIRETAIKA YEALDLSGLS 
RVDFFIDKRT GKIYLNEVNT IPGFTAISMF PKMCGASGLP YNELIMHLIE LAIDRFKTDR 
KLKTCRQS