| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2320 |
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| Symbol | |
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| ID | 2739415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2356400 |
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| End bp | 2357041 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637161212 |
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| Product | RNA polymerase sigma-24 factor, putative |
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| Protein accession | NP_972920 |
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| Protein GI | 42527822 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.213027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAT TTTCAAATTT ACTCAGAAAA GAATCTCCTG AAGCCGTGCA AGACCGCCTC
TTATGTAAGG CCGTCCTTGC GGGAAATACA GAAGCCTTCA GCCTAATTGC TGCAAAGTAT
CAAAAGCGTG TCTATTCTTT GGGAATGAGT TTTTTTAAAA ACCATGATGA CTCGGAAGAT
TTTGTGCAGG ACATAATGCT TAAAACTTTT TCGGCCCTGC CTAAATTCCG CGGAGAGTCT
TCTTTTTCTA CGTGGCTTAT GAGGATTGCC TATAATTCGG CGATAAACTC GGTTAAGCGT
AAAAGAGAAT TCGTTTCCGC CTTTGACGAT TTTGAGATAA AAACAAACGA TTTAACTCCC
GAAGAAAGGC AAATACAAAA CTGTGTAAAA AATGCAATCA GGCGGGCTGT AAACGATCTT
CCCGAAAAAT ACAGAATATG TATCGACCTT TATTTCTTTT ATGATATGCC CTATGCCGAT
ATAGAATCCA TTACCGGTAT ACCCGTAAAT ACGATTAAGT CCCATATTTT CCGCTCAAAA
AAAATATTAA AAACCGAGCT TGAAAATCAA GGAATTTACG GACAAGAGGA AAGCCCCGAA
TATCCCGTTT TATTTAAATT GAATTTGGCC TATGACATGT AA
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| Protein sequence | MIKFSNLLRK ESPEAVQDRL LCKAVLAGNT EAFSLIAAKY QKRVYSLGMS FFKNHDDSED
FVQDIMLKTF SALPKFRGES SFSTWLMRIA YNSAINSVKR KREFVSAFDD FEIKTNDLTP
EERQIQNCVK NAIRRAVNDL PEKYRICIDL YFFYDMPYAD IESITGIPVN TIKSHIFRSK
KILKTELENQ GIYGQEESPE YPVLFKLNLA YDM
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