| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2300 |
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| Symbol | |
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| ID | 2740265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2340043 |
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| End bp | 2341524 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637161189 |
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| Product | trypsin domain/PDZ domain-containing protein |
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| Protein accession | NP_972900 |
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| Protein GI | 42527802 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.726424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAT TAAAAAATCC GCTTTCAGCG ATGGCCGGAA TTTTATTGAT TATGCTTGTT
TCGGTTGTTT TTCTTTCAGC CCGATGTTCA AGTAATCCCG AAAATGCTTC TACAGTGTAT
GCCGATCCGG GGTTAAAGAC CGAGCTGAGT AAAGAGTCTG TTTCGGCTCT TGAATCTCTT
CAAAAAGCAA ATCGAGAGCT TACTTCCATG ATTTTACCCT CGGTAGTTAC CCTTGATGTT
GTAGAAACAA GAAAGGTTCA AAACAATATA GACGGTTTTC CTTGGTTTTT CTTTAACCGC
CCTCAAGATC AAAAAGACGG TCAGGGGGAA AGGGAATATG AAGCCGAAGG TATGGGCTCA
GGTGTTATCG TAAGAAAGAC GGGAAAAACA TATTATGTTC TGACAAACCA GCATGTTACA
GGCAATGCCA AGACAATTTC CGTTATGCTT TATAACGGTG ATAAGGTTCA AGGTAAGTTA
ATCGGTTCTG ATCAGAGGAA GGACGTTGCC CTTGTTTCCT TCGATTATGA TAAGGATTTA
AGGGTTGCCG TGTTGGGAGA CTCAAATACC GTACAGGTAG GAGACCTTAC ATATGCAATC
GGTGCTCCTA TGGGTTATGT GTCTACCGTT ACAAGCGGTA TTGTAAGTGC GGTAGGCCGT
TCAGGCGGAC CGAACAGAAA TAATATAAAC GATTTTATCC AAACGGATGC AGCGATAAAT
CAAGGCAACT CAGGCGGTCC CTTGGTCAAT ATCTATGGTG AGGTTATAGG CATAAATAAC
TGGATTGTTT CATCAAGCGG CGGGTCTCAA GGTCTTGCCT TTTCGATTCC TATAAACAAC
CTCAAAAAAG CTATCGATGA TTTTATTACT TCGGGTGAAA TCAAATACGG TTGGCTTGGT
GTTCAGCTTC TTGAAATAAA CGATAAGTTT AGAGAAAGCT TAAACTTAAA GGATATTGAA
GGTGCTTTTG CAGGACAGGT ATTTTTAGGT TCTCCTGCGG ATAAGGGCGG TATAAAGCCC
GGTGATTATA TTACCGAGGT AAATTCGACA AAGGTTAAAA GTGTTGACGA TATACTGCGT
GTTATCGCCG ACTTAAAGCC GGGAGAATCT TCATCCTTTA AGATTTTACG AAAAGGAAAA
GAAATCTCCG CAACCGTAAA AATAGAAGAA AGAGATGAAA AAAATGTAGC CGATTCTTCC
AAACTTTGGC CCGGTTTTGT TCCGTCTCCT TTAACTGAAG AAATTATAAA ACAACTGGAG
CTTAAAAAAG GTCAAAACGG CGTTTTGGTA ACAAGTTTAC AGGCTAAGAG CCCTGCTGCC
GTTATGAGTT TACAGCCGGG CGACCTTATA GTAAAGGTTA ACGGAAAAGA TGTAAAAGAT
GTTTTGAGCT TTTATGATGA GCTTTCAAAC GCAAAGGGCG AGATTTGGTT TGACTTTATA
AGAGAAGGCC ACAATTTGGT TACCCCAAAG ATTAAAAGAT AA
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| Protein sequence | MRKLKNPLSA MAGILLIMLV SVVFLSARCS SNPENASTVY ADPGLKTELS KESVSALESL
QKANRELTSM ILPSVVTLDV VETRKVQNNI DGFPWFFFNR PQDQKDGQGE REYEAEGMGS
GVIVRKTGKT YYVLTNQHVT GNAKTISVML YNGDKVQGKL IGSDQRKDVA LVSFDYDKDL
RVAVLGDSNT VQVGDLTYAI GAPMGYVSTV TSGIVSAVGR SGGPNRNNIN DFIQTDAAIN
QGNSGGPLVN IYGEVIGINN WIVSSSGGSQ GLAFSIPINN LKKAIDDFIT SGEIKYGWLG
VQLLEINDKF RESLNLKDIE GAFAGQVFLG SPADKGGIKP GDYITEVNST KVKSVDDILR
VIADLKPGES SSFKILRKGK EISATVKIEE RDEKNVADSS KLWPGFVPSP LTEEIIKQLE
LKKGQNGVLV TSLQAKSPAA VMSLQPGDLI VKVNGKDVKD VLSFYDELSN AKGEIWFDFI
REGHNLVTPK IKR
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