| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2006 |
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| Symbol | |
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| ID | 2740353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2024561 |
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| End bp | 2026930 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637160896 |
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| Product | hypothetical protein |
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| Protein accession | NP_972609 |
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| Protein GI | 42527511 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000691446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG AAAGTTTGCA TATATTTTTT AAAAAGATCG GCGAGTTTCA ATTAAAATAC
CGCTGGTTGT TAGTTATCTT ATTAGCAGCT CTAACCGTAT TTGCCGCAAT GGGCTTAAAA
AAGTTTAGAG CCACGTCAAT GACCGAAGAA GCCTTCGTAA ACCTAACCGC TCAGATGAAA
GAACATGAAG ACAGGTTTAA AGAGCTTTTC GGAAGCAATG ACACCATAGT TTTGCTTATA
GAATCCGATG ATGTTTTTAA GCCTGAGGTT TTAAAAATGA TTAAAGAAAT CGGAAACGAA
CTTTTGGAAA AAATTCCGTA CGCCGATTCG ATTACTTCTA TCACCGATAT CGATATAAGT
ATCGGAACGG AAGAAGGAAT CGAAATAAAA AATCCCTTTA AAGACGGTAT CCCTGAAGAT
CCTGCCGAAC TTAAAAAAGC AAAGGATTTT ATTTTATCCC GAAAATCCAT TGTAAATAAA
CTTGTTTCAA GCGATGCAAA AGAAACCTGG CTTGTTCTTT CGCTTAAAGC AACCCCGAGT
AGAGAAGAAT GGATGAAAAC TTCGGATAAG GAGCTTATGT ACATCATGGG AGAAACAGCA
ATCGATATTG TAACAAATCC CAAATACAAA AGCTCTGCCT ACACAATAAA ACCTGCCGGT
CTTCCCTACA CTGAAACGGA AGAAAAAATT GTTATGAACG CAGACATAAA AAAATGCGTA
AGTCTTAGTT TTATGTGTAT GATAATTCTT CTCGTTATTT TTGCACGCTC GCTAAGAGGT
ACGATAGTAC CTATCATAGC CACCACAGGC GCAATAGTTT CAGTTTTGGG CTTTATGGGG
CATTTAAATA TTGAAGGAAG TTCCGAAATG CTTTCCGTTC CAATAATTCT TGCAATGGCT
CTTTCGGTAG GCTACTCAAT TCACCTTGTA AATTCTTTTA GAAACAGTTT TTACGCAATA
GGAAAACGTA AAGAAGCCGT TATCGATTCA ATAGAAAATA CGGGCTGGCC TTTATTTTTT
ACGGTTGTTA CGACAGTTGC TTCCGTTTTA TCGTTTTTAA CGGTTGACCT CGAGCCGATG
CATTGGATGG GGCTTGCAAG CGCCGCTATG GTTTTTGCGG TTTATCTCTA TGTGAGCATC
TTAATTCCTA TTTTGATGAG TTTCGGAAAG GACTGTCCTC CTGAACAAAA TAAGAGTGCA
ATAAGATATA AAAAGCTGGA TTCTTTTTTT GAAAAGTTCG GAAGGTCCGT ATTAAAAAAA
CGAAAACCGA TTTTAATTGT TTTTGCACTT GTAACAGCCC TTTGTCTTCC CGGTATTTTT
ATGATAACCG TAAACATGGA CAGCTTTAAC TTTATGGGAA CAAGAATTCC TTATGTAAAA
CGCATTTATG AAATTACACA TTCTCAATTG GGAGCCTATT TTAACTACAA TGTTATGCTG
ACATTTAAAG AAGAAGATGC CGTAAAAAAA CCGGAAAACT TAAAAAAACT GGAAGAGTTA
AGCCGCCTCA TATCGGGCTT TAAATTGACA AAGCTGAATA ACGGAGTGCC GAAAATATTT
TCAATTTTAG ATGTTGTAAA AGATATGAAT CAAACCATGC ATGCCGATGA TCCGGCCTTT
TATTCAATAC CTGAAGATGA AGACCTCTTA GCACAGCTTT TGTTTTTATA CGAAATATCG
GGTGGAGAAA CTTCCCGTTG GGTTGATGAC GAATTCAGGA CTCTCCGAAT GACCGTCGAT
GTTGCCGCCT TTGACGGAAA TGAACTTGCC GCCAATTTGG AAAGCGTGTA TAAAAAATGT
GCGGAACTTT TCCCCGATGC GGAAACCTTT TTAACAGGAG CTGCAGCCCA TGCCGCAGAG
ATGAATAACA AAATAGTATA TGGGGAAATA AATTCTTTTT TTACATCTCT TGCAGCAATC
GGTGTTTTAA TGATGATTGT ATTCGGAAGT ATTAAAATGG GGCTCATAGG TCTTATACCT
AACATTATGC CGATTATTAC AACAGGAGCT ATTATGGGCT ACTTCCATGT TCCTCTAGAT
ATGGTAACAA TGGCGCTTAT GCCCATGGTT CTCGGTATAG CAGTAGATGA TACAATCCAT
TTTACCAACC ATACAAAGTA CCTATTTGAA AAGGAAGGCT CTTATGATAA AGCGATTGTC
GGTTCTTTTT ATTCTATCGG AAAAACCTTG GCAATGACTA CGATAATTTT GTCGGTTACT
TTTTTAATGT ACATGGCGAG CAAAATAGAT GCATTCCTGC GATTGGGAAT CTTGGCGGCA
GTCGGTCTTT TTTCCGCTCT TATTGCCGAC TATCTGATGA CACCGGTATT GATTTATATA
ACCAAACCTT TCGGAAAAGA GAAAAAATAA
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| Protein sequence | MKLESLHIFF KKIGEFQLKY RWLLVILLAA LTVFAAMGLK KFRATSMTEE AFVNLTAQMK
EHEDRFKELF GSNDTIVLLI ESDDVFKPEV LKMIKEIGNE LLEKIPYADS ITSITDIDIS
IGTEEGIEIK NPFKDGIPED PAELKKAKDF ILSRKSIVNK LVSSDAKETW LVLSLKATPS
REEWMKTSDK ELMYIMGETA IDIVTNPKYK SSAYTIKPAG LPYTETEEKI VMNADIKKCV
SLSFMCMIIL LVIFARSLRG TIVPIIATTG AIVSVLGFMG HLNIEGSSEM LSVPIILAMA
LSVGYSIHLV NSFRNSFYAI GKRKEAVIDS IENTGWPLFF TVVTTVASVL SFLTVDLEPM
HWMGLASAAM VFAVYLYVSI LIPILMSFGK DCPPEQNKSA IRYKKLDSFF EKFGRSVLKK
RKPILIVFAL VTALCLPGIF MITVNMDSFN FMGTRIPYVK RIYEITHSQL GAYFNYNVML
TFKEEDAVKK PENLKKLEEL SRLISGFKLT KLNNGVPKIF SILDVVKDMN QTMHADDPAF
YSIPEDEDLL AQLLFLYEIS GGETSRWVDD EFRTLRMTVD VAAFDGNELA ANLESVYKKC
AELFPDAETF LTGAAAHAAE MNNKIVYGEI NSFFTSLAAI GVLMMIVFGS IKMGLIGLIP
NIMPIITTGA IMGYFHVPLD MVTMALMPMV LGIAVDDTIH FTNHTKYLFE KEGSYDKAIV
GSFYSIGKTL AMTTIILSVT FLMYMASKID AFLRLGILAA VGLFSALIAD YLMTPVLIYI
TKPFGKEKK
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