| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1983 |
|---|
| Symbol | |
|---|
| ID | 2740436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1993466 |
|---|
| End bp | 1996429 |
|---|
| Gene Length | 2964 bp |
|---|
| Protein Length | 987 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637160873 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972586 |
|---|
| Protein GI | 42527488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTTTAGAGAT TTTAATAATT TCAGCGGTAT TGCTGACAAC GGCCATTGTA
TTTACAAGCT GTAAACAATT TATAGACAAT CCTGAAGAAT TCTTAGGTTA CTGGTCGAGC
GAAGTCGTTC CTACAGGATT CAGTATTGAT AAGCCCTATC AAATAAGTAA TGACGGAGCA
CTGTGCATAC CGTCGGATTC GCCTGTAACG ACGCTTACGA TTAAACTGCA TAACCCGAGA
AAATTCAGCT TAATTACGCC TACATCAATG TCCTCAGCAG CAGACGTGCA GAAGATTATA
AATTTTCCCG GGCTTTTAAC ACAGCCGGCA TACAACACGG ACTACACTTT AGAGCAGACA
CCTGACAAAA CGGCATTGAA GCTCACGTAC AATTCAGCCT TTTTAAAAAA TCACGAGTGG
GGTACGGGTA ACATAAGCCC CGAAATTACC CTCACTTCCA CAGACGGTAG ACCATTCAAT
AAGAAGTTCA GTCTGAACCT AAAGGCGGAC ACAGCGCCTA AACTCAGTTC TTCCATAACA
ATCGGTAAAA CGGCAAACCC TATAGGCGGT AAGTATTATT ACGTTATTAT ACTGAAAGCC
GAAGATATGG CCGAAACGGC GGGTACCGGA TCTTCTGCCG GAAAGCGACA GAAGGACATT
GAAGAGCTGT CCGTAACAGG TGGTGATTCG GCTGCGATAG CGTTTACATC GGGAAATACA
GCCTTTGAAC CAAGCGGCCG ACTGCTTGCT TCAACCGAAG TTGTTCATCT TTCAGGTGAT
GAGACTTCGC CGGCAGTTCC CTCATGGAAT CCTGCTCTCA ATAACGATTC TTGGGCATTG
CGTTATAGAA CGGATACGGA AGTAAAGACT GCAAGAAAAA ACTATACATT CACTCTCATA
GATGAAGCAG GCTTAAAATC TTCTGACATT CACGTATCAA CCCCTGCAAC GAAGGCGGAA
GCTGCAAAGC TCTCCTATAA TTCAAATGAC ATATCTATAC AAGCCGGTAA CCCAAGCAGT
CCGTATCTAA TAAGTACAGA ATCGTCGATT ACAGTTAAGG CAAAAACGGA AACAACCGGT
GCAACAATAA GGGGTACACT CTTCAAGAAA GAATCAAGCA CATGGCGATT TCTTAACGAC
ATAGACAGCA GCTCTAATAC CGAGGTTGAT ATAATGTTGA CAGCTCCATC TGGTATCGGT
TCTGAGATAG AATATCAAAT AAGTCTTACT GTAAAAGAAG AAGGCTTTGC TGATAGCGAT
ACAAAAGTTT TTTATGTTAA AGTAAGAAAA GGTACGGTCT TAGAGATTAA TAGCACCGAT
AGCGGTGCAT GGACCACGCT TAAAACCGAG GTCGAAAGGT CTAGCGGCGG TCCCGACATA
ATCAAAATCA CCGGCAAAAT TAAAGCTCCT TCTGGACCGA ATAACCAAAT TAATGTAAGT
CGAACCGTTA AAATAATGGG CTCTAATAAG AATACCGATA TATTGGATGC TGATAATGAA
ACCTTTATTT TTAATATGGG GCTACAAGGC GTATTGACTC TTGAAAAGCT GACCCTGCAA
AAAGGAAAGA ATACCGATAG TTCCAGAGGT GGCGGTGCAA TCTACTGTGC CGGCGGAGAA
TTGACAACAG ATGATATTAT TATCAAAGAC TGTACGGCAA CAAAGAATGG AGGCGGTATT
TATGTACACA ACCATGGTAA CATTATCTTG ATAGATACGG AAATAAAGGG TTGTACCGCA
GCGGCAGACG GCGGCGGTGT GTATGTGGGT GAAAACGGTA CTTTTAAGAT GCATGGCGGC
ACAATTAAGA ATAATACAAG CATTCTGGGA AAAGGCGTTT ATGTACAAGG TTCTACAGGC
TATCTCATCT CCGACGGTGA GTTTATCATG GGCGGCGAAG CCTGTGTCGG AGAATGGGGA
AACGGTACCC TGCAAGACGG AAATGATGTG TATTTAGATG AGGGTAGTGG TTCTCTTGCT
CACATAAAAA TTGACAAAGG TAAGCCTATA ACGAAATCGA AAGCTGCCTG TATTACTCCT
GAATCCTATA GTGCCGGCGA AACGGTACTA ATGATGTTGG GCGGCAGTAC GGATGTAGGG
GCTTATAATG ATAGGTTCAC CGTAACCCCG GAAGATTCAG GCAGCGGCAA TACGCAGACA
TGGTCAATAG ATGATAATGG GCAATTAACA AGATATACGA AAGTACGGTA TGATCAGTTG
GAAGCCTTCC TTACTTCGCC TCAGGCTTCG TCAACCGCAA TAAACCGTAT CGAAATAACA
GGTGAGATAC CGCAAAATCA CTTTGATGGC AGCAGCTCGG GTTCCGGAGA ACTCAACAAA
AGGATAAAAA AAGCCGGCTC TAAAAAACTT GCGCTTAAAC TGCCCGCCGG CATTTCAGAC
GTTACTTCGA TGGAAAATTG TTTTGCAGGG TGTGGCAACC TTGTTTCTCT GGAGAACATT
CCTTCAGGCG TTACAAATAT GAAGAACTGT TTTTTGAACT GCACCGGTTT AACCACAGCT
CCATCTATTC CTGATGGTGT TATGAATATG GAGGGTTGTT TTAGAGGATG TAACAAATTA
ATCACAGCTC CTACTATTCC TGATAGTGTT AAGAATATGA AAGAATGTTT TTTGAACTGT
ACCGGTTTAA CCACAATTCC TGGTATTTCG AATAGTGTTA CGGATATGGA GAGCTGTTTT
AGAGGATGTA AAGAATTAAC GACCGGTCCA GATATTCCCT CAAGCGTTAC GAATATGAAT
AATTGTTTTT TGAACTGTAT AAAGTTGAAA GGAGTAAAAA TTAATCGTGA TTATTATGGC
TGCAATTTTG CCGATGCTTT TCACGGCTGC TCTGGCTTGA ATGCAGGGGG AATAAAGGTT
CCTTCAATTT ATCTTCAAAA CTATAAGGAT AATGCGGGCA CTATGGGAAC AAGTGCTAAT
AAGTTTTCTG CAATAACACC TTAA
|
|---|
| Protein sequence | MKKILEILII SAVLLTTAIV FTSCKQFIDN PEEFLGYWSS EVVPTGFSID KPYQISNDGA
LCIPSDSPVT TLTIKLHNPR KFSLITPTSM SSAADVQKII NFPGLLTQPA YNTDYTLEQT
PDKTALKLTY NSAFLKNHEW GTGNISPEIT LTSTDGRPFN KKFSLNLKAD TAPKLSSSIT
IGKTANPIGG KYYYVIILKA EDMAETAGTG SSAGKRQKDI EELSVTGGDS AAIAFTSGNT
AFEPSGRLLA STEVVHLSGD ETSPAVPSWN PALNNDSWAL RYRTDTEVKT ARKNYTFTLI
DEAGLKSSDI HVSTPATKAE AAKLSYNSND ISIQAGNPSS PYLISTESSI TVKAKTETTG
ATIRGTLFKK ESSTWRFLND IDSSSNTEVD IMLTAPSGIG SEIEYQISLT VKEEGFADSD
TKVFYVKVRK GTVLEINSTD SGAWTTLKTE VERSSGGPDI IKITGKIKAP SGPNNQINVS
RTVKIMGSNK NTDILDADNE TFIFNMGLQG VLTLEKLTLQ KGKNTDSSRG GGAIYCAGGE
LTTDDIIIKD CTATKNGGGI YVHNHGNIIL IDTEIKGCTA AADGGGVYVG ENGTFKMHGG
TIKNNTSILG KGVYVQGSTG YLISDGEFIM GGEACVGEWG NGTLQDGNDV YLDEGSGSLA
HIKIDKGKPI TKSKAACITP ESYSAGETVL MMLGGSTDVG AYNDRFTVTP EDSGSGNTQT
WSIDDNGQLT RYTKVRYDQL EAFLTSPQAS STAINRIEIT GEIPQNHFDG SSSGSGELNK
RIKKAGSKKL ALKLPAGISD VTSMENCFAG CGNLVSLENI PSGVTNMKNC FLNCTGLTTA
PSIPDGVMNM EGCFRGCNKL ITAPTIPDSV KNMKECFLNC TGLTTIPGIS NSVTDMESCF
RGCKELTTGP DIPSSVTNMN NCFLNCIKLK GVKINRDYYG CNFADAFHGC SGLNAGGIKV
PSIYLQNYKD NAGTMGTSAN KFSAITP
|
|---|
| |