Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1953 |
Symbol | |
ID | 2741516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1969120 |
End bp | 1969761 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160843 |
Product | TetR family transcriptional regulator |
Protein accession | NP_972556 |
Protein GI | 42527458 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.957288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCT GCAAGCGTAC GGCAGATACA AAAGATCTGA TACTTAAAAG TGCAAAAAAA TATTTTCTTG AATACGGCTA TCAGGCGGCT CCTCTTAGGA AGATTGTATC GGAAGCAGGA TTTACGCCCG GAGCATTATA CGGCTATTTC AACTCAAAAG AAGAGCTTTT TTATGCAATT ACCGATCCGG TAGCAAATAA GTTGATGGAG GTACTTGACC GTATCCGAAG CGAAATGGAT GCTTTGCCCA AAAAAGAACG GCTTTACGGT ATGGGCAAGG TCTACTACCC GAATATTCCT AAAATCGTTG ATATTTTGAT TGCGGATAGA GATGCCGTAA AACTCATTGT AAACGGGGCA AAGGGGACAA AGTACGAGAA TTTTCTTGAT ACCATAGCCG GACGAAACGC TTTGACTATC AGTAAAACCG TAAAAAATAT TGAAGAAAAA AACATTTGCC CTATTAAAGA ACAGACGATA GAAGTTTTGA TGGAAGGTTA TATTGCAACA CTGTTTAGGC TCATCATTTC GGACAAGGAC AGGGAAACAA TTATCCGGTG TATGGAAATG ATAGGAAAAA TATATGAAAC GGGAATTATC GCACTTATAC AAAAGGAATG GGGGAATGAA AATGACATCT GA
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Protein sequence | MEACKRTADT KDLILKSAKK YFLEYGYQAA PLRKIVSEAG FTPGALYGYF NSKEELFYAI TDPVANKLME VLDRIRSEMD ALPKKERLYG MGKVYYPNIP KIVDILIADR DAVKLIVNGA KGTKYENFLD TIAGRNALTI SKTVKNIEEK NICPIKEQTI EVLMEGYIAT LFRLIISDKD RETIIRCMEM IGKIYETGII ALIQKEWGNE NDI
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