| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1917 |
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| Symbol | |
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| ID | 2740415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1934854 |
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| End bp | 1937484 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160803 |
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| Product | cytidyltransferase-like protein |
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| Protein accession | NP_972520 |
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| Protein GI | 42527422 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00878839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGTT TATACGAAGG AACGGCTGTA ATTGTTCAAG CTCGATTAAG TTCCAAGCGT
TTGGTTAGAA AGGCTTTGTT GGACTTGGGC GGCATGCCTA TATTATACAG GGTTTTGGAT
TCGGTTAGAG AATTACCTGC CGAACATTTT ATTTTGGCCT GTGATACCAA TTCAAAAAAA
GAATTTCAGC CCATAGCCGA ATCCTTAGGC TATCTTTGTA TTGACGGTTC CGAAGAAGAT
GTTTTAAGGC GTTTTTGTGA TGCCGTTGAG TTTATAAATT CCAATTTTCC GAATAGACCT
TTAAAGGCCG TTATCAGGGT TACAGCCGAT AATCCGTTTC TTTTTGTACA AGCTGCCGAA
GCTTCAATCC GCCGTTATTT TGAATTGGGA GAGCCCGATT ATTTTACTTA CACAGGTCTT
CCTCACGGAT CGGGAATAGA AATTATCAAG GCCGATTCTC TTTTAAAAGC CGCTTCCGAA
ACCGATGACG AATATGCTCA TGAGCATGTG TCTCCTGCAA TTTACGGACA TTCCGATAAA
TATAGGTGTG TCAGAGAGAC AGCTCCGCCT GTGTGGTATT ATCCCGAACT GCGGACTACC
GTTGATACCG CCGAAGACTA TGAAAAAGCA AAAGAAATTT ATAAGCACTT AATTTCAAAT
AAAAAGGCGG TTCCGTTTAC GCCTGCCGAC ATAGTTGAGG CTGTAAGTTA TGCCGACAGA
TTGGTTGTAT TCTGTCCCTC GGTTACTCCG GGGCGGGGAA GCGGACACTT GCACAGGGTT
TGCGATTTAG CGCGATCTCT TTTGGGAAAG TTAAGATGTT TGATTTATAT ATCCGAGTCG
GATTATCCTA ATTTTTCAAA ATCTCTTTTA AATTCCATTC CTTCCGAAAT AGTCGTAAAT
GAGTTTCCAA AAAAAGCGGC ACTAATCGTA TTGGACAGAT TTAGAACATC TGAAGATGAG
ATGGCTTTTT TTAAAAATAG GGGGCATGTT ATCGCAATTG ACGATGGCGG CTCCGGCCGA
AGATTTGCCG ATTTTATTTT GGATATATTA CCTTCACTTA AAAATGTAAG CTCGTCTGAC
GATGATTCCG GCTCTGAATG GCTTTCTAAT CTTTTTTCGC CTGAGTTGAT ATCCCTTCCG
GTAAATAGGC GAAAGCTCCT TTCAACTCAG AGATTGGCAA AAAATAAAAA GATACACTTA
ACTCCTAAAC AAACAAAGGT TCTTGTAGTT TGCGGAGGGG AAAATTCTTA TAGGATGACC
CTTCCAATTG CACAAATTCT AGCCTCCTTA AAATTCGATG TTTCTGCAAT AGATATAAAT
TTAGGTTTTG AAGATATAAA ACGGCTTGAA GGAAAGGTTA AAGCTTTTTC AAGAATTGAT
AACTTAAAAG AGAGACTTTA TGAATGGGAT TTGGTTGTAA CTCATTATGG GTTCATTGCC
TTTGAAGCCT TGGCTGCAGG CTGTTATGTG CTTTTGGTTT CTCCTACCGA CTATCATTAT
AAGTTAGGTT TAGCCGCCGG CTTTACATCT CTTCCTGCCG GGATACCTTC CAGTACCGAC
TTTGCTAATG TCTTTTCTCA TGGAATTAAG ATACCTAAAA TTATTACACC TTATTCTGAA
TCCAAGGATT TATATTCCTT GATAAAAAAT TTGTCTTTCG GTTCACGGTA TCTCTGTCCT
ATTTGCGGGG AAGCCGGTAC CTCCGAAGTT ACGGCCAGAA CTCCCGATAG GACTATGGCA
CATTGTTTAA AGTGCGGAAT GTATCATATT TCTTTTATAA TAAGTCCTCC AAAACAATAT
ACCAAAACTT ATTTTTTTGA TGAGTATAAG GCCCAATACG GTAAAACCTA CTTAGAGGAT
TTTGAGTCTA TAAGAAAGCA GGGTATGCGC CGAATGGAAA TTATCGATAA ACTTTATATA
GATATTTTTT ATCGAAAAAG GGAATACAGT ATTTTTGACG GTGAAAAGAA AATATTGGAT
ATAGGCTGTG CTTACGGCCC CTTTGTTCTT GCTGCAAAGT ATTCGGGTTG GTATGCCGTC
GGAACCGATA TTTCGGAAGC CGCCGTAAAA TATGTAACGG ACGAGTTAAA ACTGCCGGCC
TTTGTTTCGG CTTTTCCGGT TCTCCCGAAA TCCTATGAGT ATATTTACCA AAAACGAATG
ACGGGAAACG GGTTTGAATC GGTTTCAAGA CCTATTGAAG ACGGAGGTTT TGCGGCCCTT
TCTATGTGGT TTGTTATCGA GCATTTTAGG GACTTGGATT CGGTTTTAAA AAAAGTAAAC
GATCTTTTGA TGCCGGGCGG TATTTTTGCT TTTTCAACTC CGAACTTTTC CGGCGTTACG
GGAACTTTTT CGCCTTATAA ATTTTTTGCA GAAAGTCCTA CCGACCATTA TTCCATATGG
GATTCAAGAA CTGTAAGGTC TCAGCTCAGT ATGTACGGCT TTAAAGTTTT AAAGGTTGTT
TCGATAGGTC ATCATCCTGA AAGATTTAAG TGGTGTAAAA ATCTTAAAAA GAACGGAATA
CTTTGGAACA TAGTTATGGC CATAGGCATG GCTATAAGCA AACTTTTTAA ACTCGGAGAC
AGTATGGAAG TTTATGCAAT GAAGCAGGGA AGACTGGAGG ATATAAAATG A
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| Protein sequence | MIGLYEGTAV IVQARLSSKR LVRKALLDLG GMPILYRVLD SVRELPAEHF ILACDTNSKK
EFQPIAESLG YLCIDGSEED VLRRFCDAVE FINSNFPNRP LKAVIRVTAD NPFLFVQAAE
ASIRRYFELG EPDYFTYTGL PHGSGIEIIK ADSLLKAASE TDDEYAHEHV SPAIYGHSDK
YRCVRETAPP VWYYPELRTT VDTAEDYEKA KEIYKHLISN KKAVPFTPAD IVEAVSYADR
LVVFCPSVTP GRGSGHLHRV CDLARSLLGK LRCLIYISES DYPNFSKSLL NSIPSEIVVN
EFPKKAALIV LDRFRTSEDE MAFFKNRGHV IAIDDGGSGR RFADFILDIL PSLKNVSSSD
DDSGSEWLSN LFSPELISLP VNRRKLLSTQ RLAKNKKIHL TPKQTKVLVV CGGENSYRMT
LPIAQILASL KFDVSAIDIN LGFEDIKRLE GKVKAFSRID NLKERLYEWD LVVTHYGFIA
FEALAAGCYV LLVSPTDYHY KLGLAAGFTS LPAGIPSSTD FANVFSHGIK IPKIITPYSE
SKDLYSLIKN LSFGSRYLCP ICGEAGTSEV TARTPDRTMA HCLKCGMYHI SFIISPPKQY
TKTYFFDEYK AQYGKTYLED FESIRKQGMR RMEIIDKLYI DIFYRKREYS IFDGEKKILD
IGCAYGPFVL AAKYSGWYAV GTDISEAAVK YVTDELKLPA FVSAFPVLPK SYEYIYQKRM
TGNGFESVSR PIEDGGFAAL SMWFVIEHFR DLDSVLKKVN DLLMPGGIFA FSTPNFSGVT
GTFSPYKFFA ESPTDHYSIW DSRTVRSQLS MYGFKVLKVV SIGHHPERFK WCKNLKKNGI
LWNIVMAIGM AISKLFKLGD SMEVYAMKQG RLEDIK
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