| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1730 |
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| Symbol | |
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| ID | 2739188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1783833 |
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| End bp | 1785635 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637160613 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | NP_972334 |
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| Protein GI | 42527236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0782233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA ATAAACCTAT AAAACCGCTT TTAACGCCGT GGGGCGAAAA CCTAAATCGG
GACTGTCCCT TAAACGATTA TCCTAGGCCT CAACTTGTAA GAGAAAACTG GCAGTGTTTA
AACGGACGGT GGGACTATGC AATAACGGAG ACAGAAGAGG TTCCCGAAAC ATGGGACGGA
ACTATCATAG TTCCTTTTTC GCCCGAGAGT CTTTTGTCGG GCGTCGGAAA ACAGCTTCTT
CCCGGAAAAA GATTATGGTA CCGCAGAGAA TTTGCCTTTG AAAAGTGTAA GGATGGGGAA
AGGCTTTTAT TGCATTTCGG GGCGGTTGAT CAGCATTGTT CGGTCTATAT AAACGGAAAA
AAGGCCGGCT CCCATTCCGG GGGCTATTGG CCCTTTTATT TCGATATAAG CGGTTTTTTA
AAGGACTGCG AAAACGAAAT TGTAGTCTCC GTTACGGATA ATACGGATAC GGGCGATGAA
GCTTACGGAA AGCAGACCCT CAACCGCGGA GAGATTTGGT ACACTGGACA AAGCGGTATT
TGGCAAACTG TATGGGCTGA AAAAGTTCCC GAAACCTATA TTCAGAGTGT AAAAATAACC
CCTCACTTTA AAGAAGCTGA GGTTGAGCTT GAGCTTTGTA TGAGCGGAGC CGATTTGTCT
CCTATTACAG CCAATGCTTC GGTTAAAATC TTTGACGGGG AAAAAGCGGT TGCAGAAGGA
AACTTTCAAA ACAACCGCGC CCTTGTAAAA ATGCCCGATG ATTTTAAAAG CTGGAGCCCG
GAAAGCCCTT TTTTATATGA CCTTGAAATT AAACTGGGAA AAGACAGTAT ACGGTCCTAT
TTCGGTATGA GGGAATTCGG TATTCTTAAA GGAAAAGCGG GGCCCGTTTT AAGTTTAAAC
GGAAGGCCTA TTTTTCATCA CGGTCTATTG GATCAGGGCT ATTGGAGTGA CGGCATGTAC
ACTCCTCCTT CCGACGAGGC TATGATATGG GAAATTAAAA CTATTAAAAG CATGGGCTTT
AATATGCTCA GAAAACACAT AAAAATAGAA CCGCTTCGCT GGTATTATCA CTGCGATAAA
ATCGGAATGC TTGTTTGGCA GGATTTTGTA AGCGGAGGCG GTCCATATAA GGACTTTGTC
GTAAAGTATG CTCCTTGGCT TGGTTTTAAT TTTAAAGACG GAAAAAGCCG TTATGCTCTT
CACGGAAGAA AAAGCGAAAC CTGCCGGAAA AATTTTATGC GCGATGCCGA GCGTACTATC
GATTTATTAT ACAACATAAG CTCTCTTGCA GTCTGGGTTC CTTTTAACGA AGGTTGGGGC
CAGTTTGATG CCGCCTCAGC AGCCGCCCTT GTACGCAAAA AAGATGCTGC CCGCCTAATC
GACCATGCAA GCGGTTACTT CGATCAGGAA GCCGGGGACT TTCACAGTTA CCACATTTAC
TATAAGGCTT TTAGACCTAA AAAAGATAAG CGGGGCAGGG TACTGGCCCT TACGGAATTC
GGAGGCTTCA GTTTGCCGGC TCAAGAACAT ATGAGCTCTG ATATTCTATT CGGCTACAAA
ATGTTTGGAA CCAAAGAAGA GTTGAATGAT GCTGTTTGGA AGCTTTATAC AAAGGATGTT
TTCCCTGCTA TTGAAAAGGG CTTGAGTGCT TCAATCTATA CGCAGGTAAG CGATGTGGAA
GACGAAATAA ACGGAATTTT TACCTATGAC AGGAAGGAAA TAAAATTTGA TGAAGCCTTG
GGATTAAAAA TTACAAAAAC ATTAAACGAA ATTTTTAAGG AGAAATTTAA TGGGAATTTA
TAA
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| Protein sequence | MRKNKPIKPL LTPWGENLNR DCPLNDYPRP QLVRENWQCL NGRWDYAITE TEEVPETWDG
TIIVPFSPES LLSGVGKQLL PGKRLWYRRE FAFEKCKDGE RLLLHFGAVD QHCSVYINGK
KAGSHSGGYW PFYFDISGFL KDCENEIVVS VTDNTDTGDE AYGKQTLNRG EIWYTGQSGI
WQTVWAEKVP ETYIQSVKIT PHFKEAEVEL ELCMSGADLS PITANASVKI FDGEKAVAEG
NFQNNRALVK MPDDFKSWSP ESPFLYDLEI KLGKDSIRSY FGMREFGILK GKAGPVLSLN
GRPIFHHGLL DQGYWSDGMY TPPSDEAMIW EIKTIKSMGF NMLRKHIKIE PLRWYYHCDK
IGMLVWQDFV SGGGPYKDFV VKYAPWLGFN FKDGKSRYAL HGRKSETCRK NFMRDAERTI
DLLYNISSLA VWVPFNEGWG QFDAASAAAL VRKKDAARLI DHASGYFDQE AGDFHSYHIY
YKAFRPKKDK RGRVLALTEF GGFSLPAQEH MSSDILFGYK MFGTKEELND AVWKLYTKDV
FPAIEKGLSA SIYTQVSDVE DEINGIFTYD RKEIKFDEAL GLKITKTLNE IFKEKFNGNL
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