Gene TDE1677 details

Gene Information

• Locus tag: TDE1677
• Symbol: ssb
• ID: 2740132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1729773
• End bp: 1730279
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637160561
• Product: single-strand binding protein
• Protein accession: NP_972282
• Protein GI: 42527184
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000004529
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGATA TAAATCATGT AGTATTGGTA GGCCGCTTAA CTAGAGATGC TGAGCTTAAA 
TATACGTCTT CCGGTATTGC GGTTTGTAAT TTTGCTATAG CGGTCAACAG AAGACGGAAA 
ACAGGCGATG ACTGGAGCGA AGAAGCAAGT TTTTTTGACG TGGTTCTTTG GGGCCGGCAG 
GGTGAAGCCT TAAACCAGTA CCTTGTAAAA GGTAAACAGG TTGCTATTGA CGGAGAGCTT 
AGGCAAAACC GTTGGGAGCA AGACGGGCAA ACCCGCAGCA AGGTTGAGAT TGTTGCTAAC 
AATATTCAGC TTGTCGGAGG CTCGGCAGGT CAGGGCGGAC AATCACAGGC CGCACCTCAG 
CGCCAAGGAT CATATCAGGG CGGTGGAAAT AATTCGTATA ATGATGGAAA TCAAGCACCT 
TCTGCTTATC AAAGAAGACA GGAGCCTTCT TATGATGATT ACCAGCCGGA TATGGGAAAT 
TCAGATTTGG ATAATATTCC ATTTTAA 

 

Protein sequence

MADINHVVLV GRLTRDAELK YTSSGIAVCN FAIAVNRRRK TGDDWSEEAS FFDVVLWGRQ 
GEALNQYLVK GKQVAIDGEL RQNRWEQDGQ TRSKVEIVAN NIQLVGGSAG QGGQSQAAPQ 
RQGSYQGGGN NSYNDGNQAP SAYQRRQEPS YDDYQPDMGN SDLDNIPF