Gene TDE1645 details

Gene Information

• Locus tag: TDE1645
• Symbol: def
• ID: 2739754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1695633
• End bp: 1696142
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637160528
• Product: polypeptide deformylase
• Protein accession: NP_972251
• Protein GI: 42527153
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAT TATATTTAGG CGAAGAAACT TTGAGGGAAG TATCCAAACC TGTTGAAAAA 
ATAGATGAAA ATATTAAAAG CTTAATCGAC GAAATGTTTG TTACCGTAAA AAAAGAAAAC 
GGTATAGGCT TGGCGGCTCC GCAAGTAGGA GAAAACATAA GACTTTTTAT CGTATTTATA 
AACGAACAAA AATATGTTTT TATAAACCCT GAAATTATCG AAACGTCTCA GGAAATGTGT 
TTGATGGAAG AAGGCTGTTT GAGCATACCT AAGGTCTATG ATGAAGTTAT GAGACCTTCA 
GCCGTAAAAG TGCAGTTTTT AAATATTGAC GGTAAAATAA AGACCATTGA GGCCTCAGGA 
CTCCTTGCCA GAGTTATTCA GCATGAAAAT GACCACTTAA ACGGAATTCT TTTTATAGAC 
CGTTTAAGCG AAGAAAAAAA GGCCGAAGCT ATCGAAAAGT TTGAGCATAA AAAGGCTCTT 
TTTTCAAAAA AGAGGATCCG CCTGAGATGA 

 

Protein sequence

MKVLYLGEET LREVSKPVEK IDENIKSLID EMFVTVKKEN GIGLAAPQVG ENIRLFIVFI 
NEQKYVFINP EIIETSQEMC LMEEGCLSIP KVYDEVMRPS AVKVQFLNID GKIKTIEASG 
LLARVIQHEN DHLNGILFID RLSEEKKAEA IEKFEHKKAL FSKKRIRLR