Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1621 |
Symbol | |
ID | 2740862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1669043 |
End bp | 1670833 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637160503 |
Product | hypothetical protein |
Protein accession | NP_972227 |
Protein GI | 42527129 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTAT CGGAAATAAA ATTGTGGAAT TTTAGAAAAT ATGGCCGGAA TGATTTTGAT ATAAATGTTC CGCACTTAGT AGTTCCTTTC CATCAGGGTA TGAATGTCCT TGTCGGTGAA AATGATTCAG GTAAGACGGC TATTATAGAT GCGGTAAAAT TAGTATTAAA AACGCAAAGC TACGAATGGT TAAGAGTAAC AGACGATGAT TTCTATAATG AATCGGATCG ATTGCGGATA GAATTGCTTT TTGAAGATTT AACTGATGAT GAAGCAAAAA ACTTTATTGA ATGGCTATGC TACAAAAAAC AAGGCAATCA GCCTGCAGTA ATCTACCTCC GTGTTGTATT TGAAGCACGA CGGAATCCGA AAACAAAAAA AATTACAACA ACCGATATCC GTGCGGGAGA AGGTTCTGCT TTGTATCTGC TAACTTCAGA AGCACGCGAG TATTTGAAAG TTACCTATTT AAAACCGTTG CGCGATGCAG AAAATGAATT AATGCCGGGA AAATATTCAC GGCTTTCAAA TATTTTATTG GCACATGAAG TATTTACCAA AGAGGAAACT CACGAAAATT TTATTAATCA TCTACAAGAA TTTAATTTAT TTGTAGATAA TTTCTTTTCA GGCAATGACG AAATGCAAAT ATCAGATACT GAAGGAGCCG CAATAAAAGA ACAGTTAGAC GAATATTTAC AGTCTTTTTG TTTTAATGAT GAAAAAGCTC GATTTTCAAT GAGCGAAACA ACACTAAAAA GTATTTTAGG AAAATTGCAG CTTTCTTTAG AAAAGACACA AAATCCGGGG CTGGGAACTC TAAACCGGCT CTATATGGCA GCCGAACTTT TGAATTTGCA GCGAAAGAAT TGGGACGGTG TAAAACTAGG ATTGATTGAA GATCTAGAGG CACATTTACA TCCGCAGGCA CAGCTGAAAG TAATTGAAAA ACTACAAAGA CTAAAAGATG TTCAATTGAT TTTAACAACG CATAGCCCAA ATCTTGCTTC AAAAATTAAC CTTAAAAATA TTATTCTCTG TGCTAATAAT ACCTGTTACC CTATGGGACA TGAGTTTACA AAACTATCCG ATGATAATTA CTGCTTTTTA CAAACCTTTC TTGATGTAAC GAAAGCAAAT CTATTTTTTG CAAAAGGTCT TATTTTTGTC GAAGGCTGGT CGGAACAAGT GTTTTTGCCG TCTTTTGCAA AGCTACTTAA AAAACTGGGA ATGATAAAAA AAGATATAAC GCAAGCCGGT GTTTCAATTA TTAACATACA ATCCATAGGC TTTTTTAACT ATACGCACAT TTTTCAACGG AAAAACAATA ATGAGTCTAT ACCCATCCCG ATAGCTGTTA TTACAGATTC CGATGTAAAA TACTATGAAA AAGATAAAGA TACAGCTGAA ATCAGAATAA AAACTGATAT TGAAATAGAA CAAGCTCTAT CAGAAAAAAT GACAAAACTG ACGAAAAAGT ATGATACTAA TAACAATATA CGGCTGTTTG TAACAAAGGA ATGGACATTT GAATATGCTT TGTACAAGTC AACAGTATTC GGTAATCTTT TTGAGGAAAC GGTTAAAAAA GTACACCCAA GAATTACCTC TGATAGTAGT TCATTTGAAG AGGCTCTTGC CCAAAAACTG CTTTCTGATT CTTTAAATAA ACGGAAAATT GCATATCTTC TAGCCTCAGG TCTCGATAAT GTTTTTTGTT CAGAAAATGA ACTTAAAAGT GATGCGGCAA TACAGAATTT TATTGAGGCG GTACAATTTG TATGCAAATA A
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Protein sequence | MYLSEIKLWN FRKYGRNDFD INVPHLVVPF HQGMNVLVGE NDSGKTAIID AVKLVLKTQS YEWLRVTDDD FYNESDRLRI ELLFEDLTDD EAKNFIEWLC YKKQGNQPAV IYLRVVFEAR RNPKTKKITT TDIRAGEGSA LYLLTSEARE YLKVTYLKPL RDAENELMPG KYSRLSNILL AHEVFTKEET HENFINHLQE FNLFVDNFFS GNDEMQISDT EGAAIKEQLD EYLQSFCFND EKARFSMSET TLKSILGKLQ LSLEKTQNPG LGTLNRLYMA AELLNLQRKN WDGVKLGLIE DLEAHLHPQA QLKVIEKLQR LKDVQLILTT HSPNLASKIN LKNIILCANN TCYPMGHEFT KLSDDNYCFL QTFLDVTKAN LFFAKGLIFV EGWSEQVFLP SFAKLLKKLG MIKKDITQAG VSIINIQSIG FFNYTHIFQR KNNNESIPIP IAVITDSDVK YYEKDKDTAE IRIKTDIEIE QALSEKMTKL TKKYDTNNNI RLFVTKEWTF EYALYKSTVF GNLFEETVKK VHPRITSDSS SFEEALAQKL LSDSLNKRKI AYLLASGLDN VFCSENELKS DAAIQNFIEA VQFVCK
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