Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1514 |
Symbol | |
ID | 2739720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1560792 |
End bp | 1562069 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637160394 |
Product | permease domain protein |
Protein accession | NP_972120 |
Protein GI | 42527022 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00243073 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTGGA GAATGATAGC GGGGGCGCTT TTTAGACAAA AAGGAAAAAT GGTGATGATA GCTTTTACCA TTGCCCTAGG TGCAAGTCTT TCAACTTCTA TGCTTAACAC AATGCTTGGT GTAGGGGATA AGGTAAACCA AGAACTTAAA ACATACGGAG CCAATATCAA TGTTGCTCAT AAAGAATCTT CTCTTTTAGA TGATATTTAC GGAGAAGAAT CCGGAAACAC AAAAAAATTC TTAAAAGAAG ATGAATTGTA TAAAATTAAA ACCATATTTT GGGCATACAA TATTGTCGAT TATGCACCTT TTTTAAATGT GCAAGTAGAT TATGACGGAG CGGATAAACC TGTCCGCCTG TCGGGTACAT GGTTCGATTT TAGGATAGAC TTACATACGG GGCAGGAAGT TATAACCGGA ATAAGAAGAA TGCGTACATG GTGGGAAGTA AACGGAAACT GGGTTTCGGA TGATGATAAT TCTTCCTGTA TGGTAGGAAG TCTTTTTGCA GGAAGGAATA ACTTAAAAGT AGGGGACGAG ATAAAACTTA CAAGTGCTGT AGCCTCTAAA ACTTTAAAAG TCTCTGCAAT TTTTAATTCG GGAAGCAATG AAGATGAGGT AATTTTTACT ACATTGCATA CGGCCCAAGA ATTTTTAGGA AAGACAAATG TTTGTGAAAG CATCGAGGTA AGTGCTTTGA CAACTCCCGA TAATGATTTG GCAAGAAAGG CCGCAAGAAA CCCTTTAAGT TTAACTATAA AAGAAATGGA AATATGGTAT TGCACCGCCT ATGTAAGCAG TATTTGTTAT CAGATTCAGG AGGTTATAAC GGATGCGGTT GCAAAGCCGA TAAGACAGGT GGCCGAATCC GAAGGTGCTA TCTTAAATAA GACAAGCTTG TTAATGCTTT TAATTACCGT TTTAAGTTTG ATCGCTTCGG CTCTCGGTAT TTCAAACTTG GTAACGGCGA GTGTTATGGA TAGAAGGGCT GAAATCGGCT TAAAAAAAGC AATCGGGGCA AGTAATACGG CCGTTACCGT TTCGGTTTTA ACTGAGGTTA TGGTAATAGG AATTATCGGC GGTGCCGCCG GATATTTTGT AGGATTGGGT TTAACGCAGA TAATAGGCCG AAGCGTTTTC GGTTCTGCAA TTCCGCCGGC TCCCATGGTT ATTCCTATTG TGGTACTTAT AATTTTTTTG ATCACCCTTT TGGGAAGTCT TCCGTCGGTA AGATATTTAT TAAAGTTAAA CCCCACGGAA GTTTTGCACG GAAAATAA
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Protein sequence | MFWRMIAGAL FRQKGKMVMI AFTIALGASL STSMLNTMLG VGDKVNQELK TYGANINVAH KESSLLDDIY GEESGNTKKF LKEDELYKIK TIFWAYNIVD YAPFLNVQVD YDGADKPVRL SGTWFDFRID LHTGQEVITG IRRMRTWWEV NGNWVSDDDN SSCMVGSLFA GRNNLKVGDE IKLTSAVASK TLKVSAIFNS GSNEDEVIFT TLHTAQEFLG KTNVCESIEV SALTTPDNDL ARKAARNPLS LTIKEMEIWY CTAYVSSICY QIQEVITDAV AKPIRQVAES EGAILNKTSL LMLLITVLSL IASALGISNL VTASVMDRRA EIGLKKAIGA SNTAVTVSVL TEVMVIGIIG GAAGYFVGLG LTQIIGRSVF GSAIPPAPMV IPIVVLIIFL ITLLGSLPSV RYLLKLNPTE VLHGK
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