Gene TDE1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1426 
Symbol 
ID2739703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1468759 
End bp1469865 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content38% 
IMG OID637160305 
Productaminotransferase 
Protein accessionNP_972032 
Protein GI42526934 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATCC CTTTTTTATC ATTGCAAAAA ATAACTGAAA GCTTTGAACC GTATCTCTCG 
CAAAAAATAA ATGAGGTTGT AAAAAAAGGC TGGTATATTC ACGGAGAGGA ATGTAAAGCA 
TTTGAAAAAG AGTTTGCAGA ATTTTGCGGA GTTAAGTATT GCATTGGTGT AGGAAACGGT 
CTTGAAGCTT TAAAATTGAT TCTCCGTGCT TACAAGTTGC TTGGTGTTTT TCAAGAAGGT 
GATGAAATTA TTGTTCCGTC AAACACTTTT ATAGCTACTA TTCTTGCAGT GAGTGCCGAA 
AATTTGACGC CTGTTTTTGT TGAACCGGAT ATAAATGATT ATTTAATTGA CGTAGAAAAA 
ATAGAAGATA AGATAAGTTC AAAAACAAAG GCTATTATGC CGGTGCATTT ATACGGCAGA 
CTTTGTAATA TGGAGGCTAT TACTGCCTTT GCAAAGCAGC ACAACTTAAG AGTGATTGAA 
GATGCGGCTC AAGCACACGG CGCAAAACAA ACCGAAAAAC GAAGCGGAGC TTTCGGCGAT 
GCCGCAGGTT TTAGTTTTTA TCCGGGTAAA AATTTGGGCT GTTTAGGCGA CGGCGGCTGC 
GTTACAACTG ATTACGACGA ACTTGCAGAT GTCGTACGAA AGCTGGCAAA TTACGGGTCA 
AGTATAAAAT ACGTGCACGA ATATAAGGGA GAAAATTCCC GTCTTGACGA AATACAGGCC 
GCCGTGCTCT CGGTAAAACT GCAAAGACTT GATGCGGACA ATAATCGCCG CCGTCAAATC 
GCAGCGATGT ATAATGCCGG AATAAAAAAT AAAGCTGTTA TTTTACCTAA ACTGCACCAA 
AAAGAAGAAC ACGTGTGGCA TATCTATTGC GTTCGAGTTC AAAACAGAAA AGCCTTCATT 
AATTATTTAA AAGATTGTGG AATAGAGACG GTTATTCATT ATCCGACTCC GCCCCATAAA 
CAAAAAGCAT ATAAAGAGTT TTCTCATCTT TACTTACCGA TAAGTGAAAA AATACATGCA 
GAAGTGGTTA GTCTTCCGAT GAGCCCTTTA TTAACCGATG AGGAAGTTAA TTACGTAATT 
GAAAAAGTAA ACGAATGGAA AAACTGA
 
Protein sequence
MYIPFLSLQK ITESFEPYLS QKINEVVKKG WYIHGEECKA FEKEFAEFCG VKYCIGVGNG 
LEALKLILRA YKLLGVFQEG DEIIVPSNTF IATILAVSAE NLTPVFVEPD INDYLIDVEK 
IEDKISSKTK AIMPVHLYGR LCNMEAITAF AKQHNLRVIE DAAQAHGAKQ TEKRSGAFGD 
AAGFSFYPGK NLGCLGDGGC VTTDYDELAD VVRKLANYGS SIKYVHEYKG ENSRLDEIQA 
AVLSVKLQRL DADNNRRRQI AAMYNAGIKN KAVILPKLHQ KEEHVWHIYC VRVQNRKAFI 
NYLKDCGIET VIHYPTPPHK QKAYKEFSHL YLPISEKIHA EVVSLPMSPL LTDEEVNYVI 
EKVNEWKN