| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1347 |
|---|
| Symbol | |
|---|
| ID | 2739448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1387265 |
|---|
| End bp | 1388092 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637160225 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971953 |
|---|
| Protein GI | 42526855 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG ATGTATTGGA AAAATTGAGA GCTTTACAGG ATATTCTTGC TCGAAAAAAT
GAACTTGAAA CGGAGATTTT GGATGCCCCA AAGGCTCTTA CACAGCAGGA AGAGCTTTTG
GAAAAGTTAA AGTCCGGTTA TATCCAAATG AACAGCGAGT ATGAAGAGCT GCGTAAAGGT
ATTGCCGTTT TTAAGGCTGA TCTTTTTGAA GCTGAACAAA AGAGAGAAAA GGCCGAAAAA
GCAATGGATA ATATCGAAAC TCAGCGCGAG TATGAAATCT TGCAAAAAGA AATCGATGAT
TCTACTACAA AGGCCGAAAC TATAAGAAAG GACCTTCTGA GGCTTGAAAG TCAGTTTAAG
ATTTTGGATG CAAATATTAA GCAGGAAGAA GATCTTATTG CACAAACCGA GAAAGAACTT
GAAGAGCATA AACAGCTCTT GGACTCGGAG ATTTCCGAAA AACAAAATAA GGTAGAAGAG
TTAAAGCTGG AAGAAAAAAA ACTGTCTCCG GGTTTGAGTG ATGAAACAAT GTTTAAATTC
GACAGAATTA TTAAAAATAA ACATGGTGTC GGTATCGTTT CCGTTCAGGG AAATGTTTGT
ATGGGCTGCC ACATGATTCT TCCCGCTCAG TTTGTAAATG AAGTCAGGTC GGATCAGGAT
ATAAAATTCT GCCCTTACTG CAGCCGTATT CTATTCTATG AAGAATCCGA ATTAACGGCC
GAGCAGGAAG CATATTTTAA TGATTCCGAT ATGGAAGGTT TACTTGATAT TGGAGATTCC
GCAAATGAGG ATTTCCTTGC AAGTTTTGAA GATAAAGACG AAGATTAA
|
|---|
| Protein sequence | MDNDVLEKLR ALQDILARKN ELETEILDAP KALTQQEELL EKLKSGYIQM NSEYEELRKG
IAVFKADLFE AEQKREKAEK AMDNIETQRE YEILQKEIDD STTKAETIRK DLLRLESQFK
ILDANIKQEE DLIAQTEKEL EEHKQLLDSE ISEKQNKVEE LKLEEKKLSP GLSDETMFKF
DRIIKNKHGV GIVSVQGNVC MGCHMILPAQ FVNEVRSDQD IKFCPYCSRI LFYEESELTA
EQEAYFNDSD MEGLLDIGDS ANEDFLASFE DKDED
|
|---|
| |