Gene TDE1308 details

Gene Information

• Locus tag: TDE1308
• Symbol: tkt
• ID: 2739566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1342603
• End bp: 1344630
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637160185
• Product: transketolase
• Protein accession: NP_971914
• Protein GI: 42526816
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACG AACTGGAAGC TATTGCTCTT TCAATCAGAA GTCTTTCGAT GGACGCAATC 
GAAAAAGCCA ACTCAGGGCA TCCGGGGCTG CCTTTGGGAG CTGCCGAATT GGGTGCTGCC 
CTGTATGCTA AAATCTTAAA ACACAATCCT AAAAATCCGG ATTGGAAAGA CAGGGACCGC 
TTTGTGCTTT CTGCAGGCCA CGGTTCGATG CTTTTGTATT CAGCCTTACA TATTTCAGGC 
TACGATGTTT CAATCGAAGA TATAAAAAGT TTTAGGCAGC TCGGCTCCAA ATGTCCGGGG 
CATCCCGAAT ACGGCGACAC TCCCGGTGTT GAAACTACCA CAGGGCCCTT GGGTCAAGGA 
ATTTCTACAG CCGTAGGTAT GGCCATTGCC GAAAAAATGC TTGCCGCCCG CTTTAACACA 
GCCGAGCATA AAATAGTAGA CCATTATACT TATGCCCTTG TAGGGGAGGG CTGTTTGATG 
GAGGGCGTTT CCTCCGAAAG CTCCAGTTTG GCAGGCCACT TAAAATTAGG AAAGCTCATT 
GTTTATTATG ATGAAAATAA GATTACAATT GACGGTTCGA CCGACTTAAC ATTTACCGAA 
AACATCGAAG AAAGGTACAA GGCCTACGGC TGGCAGGTAT TGCGCGGTTC GATGTACTCC 
TTTGAAGATA TTGAACGCCT GACTCTTGAA GCTAAAAAAG ATGAAAGGCC GACTCTTATT 
ATCTTAAAGT CCGTTATAGG TCAGGGGGCT CCGACGGTTG CAGGCAAAAA CAAGGCACAC 
GGCGCTCCCT TAGGAAAAGA CGGCATTGCC GAAGCCAAGA AAAATCTTTT ACTCGAAGGA 
AAAGGCGATT TCTATGTTGC AGAAGAAGCT TATGCTTTCT TTAAAAAGAG AAATGAAGAG 
CTGGCTCTTG CTGAAGCCGA ATGGAATAAA ACCTTTGAAG TCTGGTCAAA AGCCAATCCC 
GAAAAAAGAA AAGAATGGGA TCTTTCCTTT GCCCAAGGCG GAGCTGATGA AGCCCTTGTA 
AAATCTGTAA AGCTCCCTGA GTTCAAAAAA GATGAGAGTC TTGCAACCCG TGCCGCTTCA 
AAAAAGGCCT TAAACGAGTT TGCAAAAGTC CTTCCCAATC TTGTCGGAGG TTCTGCCGAC 
TTGGAAGGCC CCAATGCCGT AGGCTTGGAC GGAATTTCAG CCTTTTCTCA TCAAAATCCT 
TCGGGAAGAT ATATTTATTT CGGTATCAGG GAATTTGCAA TGGGGACAAT CACAAACGGT 
ATTCAGCTTC ACGGAGGTTT TAGGGCATTT TGTGCGACCT TCTTGGTCTT TGCCGATTAT 
TTACGCCCGG CTCTCCGCCT TGCTGCCCTT ATGAAGCTTC CTTCAATCTA TGTATTTACC 
CATGATTCAA TCTTTGTAGG GGAGGACGGC CCCACCCATC AGCCCATAGA ACTTTTAGCC 
TCATTGCGGG CTATTCCGAA TGTTCTTGTT TTACGCCCTG CCGATGCGGA GGAAACAGGG 
GAAGCATGGA AGCAGGCTCT CTTACACAAG GACGGCCCCG TATGTTTAAT CTTGAGCCGC 
CAAAATTTAC CTGTCTTGGA AAAGAGCGAT CTTTTTTGGA GGGAATCGAT TAAAAACGGT 
GCATACATTG TAAAGGATGT AGAGGCTTCG GCCTCAGGCT GTACGGTAGG CAAGCCGGAT 
AGAACTCCTG ACGTAACGGT CTTGGCTACG GGCTCCGAGG TAAGTATGGC AGTAAAGGCT 
GCAAGTCTTG TAAAGGATAA AAAGGTCAGA GTTGTCTCCG TTATGTCGAA AGAAAGGTTT 
GAAAACTCGC CTAAGGATTT TAAACATGGA GTTTTGGGCG GATGTAAAAA GCATATCCGT 
GTTGTTACCG CCGAGGCTGG AGTCGCCCAA GGCTGGGAAG GCTGGACAGG TTGTAAGTGC 
GATAATTTTT CGATTGAGGG TTTCGGCACC TCAGCCCCCG GAGCCAAGGT CGCAGAACAC 
CTAGGCTTTA CGTCAGAAAA CTTGGCAAAG CTGATAGAGA AAAATTAA 

 

Protein sequence

MKNELEAIAL SIRSLSMDAI EKANSGHPGL PLGAAELGAA LYAKILKHNP KNPDWKDRDR 
FVLSAGHGSM LLYSALHISG YDVSIEDIKS FRQLGSKCPG HPEYGDTPGV ETTTGPLGQG 
ISTAVGMAIA EKMLAARFNT AEHKIVDHYT YALVGEGCLM EGVSSESSSL AGHLKLGKLI 
VYYDENKITI DGSTDLTFTE NIEERYKAYG WQVLRGSMYS FEDIERLTLE AKKDERPTLI 
ILKSVIGQGA PTVAGKNKAH GAPLGKDGIA EAKKNLLLEG KGDFYVAEEA YAFFKKRNEE 
LALAEAEWNK TFEVWSKANP EKRKEWDLSF AQGGADEALV KSVKLPEFKK DESLATRAAS 
KKALNEFAKV LPNLVGGSAD LEGPNAVGLD GISAFSHQNP SGRYIYFGIR EFAMGTITNG 
IQLHGGFRAF CATFLVFADY LRPALRLAAL MKLPSIYVFT HDSIFVGEDG PTHQPIELLA 
SLRAIPNVLV LRPADAEETG EAWKQALLHK DGPVCLILSR QNLPVLEKSD LFWRESIKNG 
AYIVKDVEAS ASGCTVGKPD RTPDVTVLAT GSEVSMAVKA ASLVKDKKVR VVSVMSKERF 
ENSPKDFKHG VLGGCKKHIR VVTAEAGVAQ GWEGWTGCKC DNFSIEGFGT SAPGAKVAEH 
LGFTSENLAK LIEKN