| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1273 |
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| Symbol | |
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| ID | 2740566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1307119 |
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| End bp | 1308714 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637160151 |
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| Product | oligopeptide/dipeptide ABC transporter, peptide-binding protein |
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| Protein accession | NP_971880 |
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| Protein GI | 42526782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0104885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG AAATCAAGAA AATGAGATGG ATTATGAGTA CTATGTTATT CATAATAGCA
ATTATCCTAT CGGCATGCGG AAACTCTGAA ACTACAAATG TACAAACAAA AAAAATTGTT
TCGGTAGCTA TTGCAAAGCC ATGGGATTCA ATGATGCCGC TTAATACAAA CAGCAATTAC
AGCAGATTTG TTTATGATCA AATCTATGAT AGACTGTTTA TGTCAAAGGC AAACGGAGAT
TATGAACCTC GATTAGCAAA AAGTTGGAGT TTGAATGCAG ACAGTTCTGC AATCACGTTT
AAACTACAAG AAAACGTAAA GTGGCACGAT GGAAAACCAT TTACGGCTGC AGATGTTGTT
TTTAGTTTCC AAATGTATTC TAACCCCGAA GTAGATGCAC TGAGCCGATA TCATTTGCAA
TATATCAAGG GTGTTGATTC ATCAGGTGTT CAGATTTCAG ATAAATCCAT AGCAGTATTT
GCAAACAGTG ATTACGAAGT TACATTTGAA TTTAAAAAGC CCATGTATTT CGGAAGTTTC
ATGAATGATT TAGACACGGT GTTTATTATT CCAAAACATA TTTTTGAAGG AAAAACTCCA
CAAGAAATAA ATGCACCTGA ATTATGGGCA AAAGCAATAG GCACAGGCCC CTTTAAATAT
GAAAGTGAAA TTAGCGGTGA AAGGATGGAG TTAGTCAGAA ACGAAAACTA TTTCCAAGGA
GCACCCGATA TTGAACGTTT AGTTATAAGA GTTGTAGATA CTACAAGTTT ATTGGCTAAC
TTAATGAGTA AAGATATAGA CATAAACGTA TTGGGCTCTA TCCCATTACA AGATTGGAGT
GCCGCTGTAG AAGATAAAAA TATCAACACA ACTTCGGTTC CTACAACAAA TTATACTATG
CTCATTATCA ACACCCAAAA ACCATATATG ACAAAACCGG TACGACAAGC GATAAATATG
GCTCTAAATA GGGATATATA TGTAAATTCT CTTTATCAGG GACAAGCTGT ACCGATTGTA
ACGCCTATTT CACCTCTTAG TCCATATTAC AACGAAAAGG TAAGTATTTG GTTTGATAAA
GAAAAAGCAA AGCAAATTTT GATCCAAGAA AATTTTCCGT TTGATACAAC ATTAAAATTC
TATACTTCAG CGGGAGGAGA TAATCAACGG TTAGCTGCTT TAATTATTCA GGACTTAGAA
GCAATTGGTT TAAAAGTAGA AATCATTCAA GCAGATTTTT CAAAACTAAT GGCTGACATG
AGAAAAGGTA GTCATGATTT TGGAACAATA GGATCCGGAG GATCAATGGA CCCTGGAGAA
AGCCGGGAAA TGATTGCGAC AGATAGTGCA GTAAACTTTT CACATATTAA GGACACAAGG
CTCAGCGATT TAATTGATGA AGGAAATGAT AAGCTTGATT TTAATGAAAG AAAGATTATT
TTCGATAAGT ATCAAGAAGC TGTTAAAGAT GAGTCCGCTA TTGCTTATTT GTTTACAAAA
AATAGTCTGG TAGGTTATAA TCCAAAACTG GATAATGTTA TCATTGAAGA CTTTTCCAAT
CTTAACTGGA AAATTTGGAC GTGGAAAGTA AAATAA
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| Protein sequence | MKKEIKKMRW IMSTMLFIIA IILSACGNSE TTNVQTKKIV SVAIAKPWDS MMPLNTNSNY
SRFVYDQIYD RLFMSKANGD YEPRLAKSWS LNADSSAITF KLQENVKWHD GKPFTAADVV
FSFQMYSNPE VDALSRYHLQ YIKGVDSSGV QISDKSIAVF ANSDYEVTFE FKKPMYFGSF
MNDLDTVFII PKHIFEGKTP QEINAPELWA KAIGTGPFKY ESEISGERME LVRNENYFQG
APDIERLVIR VVDTTSLLAN LMSKDIDINV LGSIPLQDWS AAVEDKNINT TSVPTTNYTM
LIINTQKPYM TKPVRQAINM ALNRDIYVNS LYQGQAVPIV TPISPLSPYY NEKVSIWFDK
EKAKQILIQE NFPFDTTLKF YTSAGGDNQR LAALIIQDLE AIGLKVEIIQ ADFSKLMADM
RKGSHDFGTI GSGGSMDPGE SREMIATDSA VNFSHIKDTR LSDLIDEGND KLDFNERKII
FDKYQEAVKD ESAIAYLFTK NSLVGYNPKL DNVIIEDFSN LNWKIWTWKV K
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