| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1246 |
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| Symbol | |
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| ID | 2741422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1279179 |
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| End bp | 1281707 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637160124 |
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| Product | putative lipoprotein |
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| Protein accession | NP_971853 |
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| Protein GI | 42526755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.229851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC TTTTAACTTT TTTGACAATT TTAACAGCGG CAGTTGCCGT AATTGTACTT
TTTACAGCCT GCGAGCAATT TCTGAAAGAT CCGGAGGATT TTTTAAGTTA TTGGGCGAGC
GAAGCCTTTA TCAAAGACCA CAGCATAGGT GCGGTAGCTA GACCGGACGA AGCGGGTGTG
CCTTGTGTCA GCTCTTCACC CGAGGTGCAT ATTATGCTTA CAGTGCATAA CCCGAAAAAC
TTTCCGCTCG TTATGCCGAC TTCTTCGGAA TCTGCGGGCA TTGTCGAATT TAAAGAACTT
TCCCAACAGC CTACGGAAGG AACCCACTAT GTACTGGGGC AAACCGCTCC CGGCAGGCTG
AAGCTTACAT ATAAAGAAGC CTTTTTACAA GAATACGAAC AAGGTTCAGG CAGTTTAAAC
CCGACTATCA CCCTTAAGGC TACAGACGGC AGGGTATTTA AGAAAACCTA CACCTTCGGC
ATAAAATCGA ACACCCCGCC GCCGGAACCG GCAGTAGTGC TTGCAAAACA GACTAATGCT
TATCCTCTTC CTTCGTATTA CGTGCTCTGC ATAGATACAA AAGATTTGGT TGCTTCTTCT
GCCATTGTAA ACGGAAAATA TATCCATGAT GATATTGCAT ACGTTACCAT AAACGGAACA
TCATACAACT TAAAAATGAA CAATGCCCAT AACGGTTTTA TCGAAAAACC GGCGACAGAA
TCATTTCTTG AAAACGGTAC AGGACTTATG GCGGTAGGCA GTGCACAGCT GCCTACAGCG
AGCCCTTGGG TTTTATACTA CAAAACGAAC ATAAAAATAA GAGACAGTAA CCCGCTTACA
ACGTACCGTA TAACCTTGCG CGACAAAGAA GGTGTTGTTT CGGATGAGGC TGTCGCAACG
ATAGCAGCAA GCGGTCCGAC TCACACTGTA ACCTTCAGCG TAGAGGGCGG AACTGGAATG
CTTAAAGCAG AAGTTAACGG CACTGAAATC CATTCGGGAT ATGACGTCGA AAAGGGCAAA
ACGGTAACCT TTACCGCAAC ACCCGCTGAC GGCTGGAAAG TTAAAGGCTG GACGGCTTCT
GCCGGCACGC TTTCGGTCGG CGGCACCGAC ACTACGGCAA CGCTGACCGT AACTGACAAC
GCAACCGTAA CGGTCAAGTT TAAGAAGATT ACAACGGTAA ACGGAGGTGA CGGCGCGTGG
AAGCTGCTGA AAAAAGTTGT TGAAATCGCT GATCCGAACT CCACCATCAC CATAGACGGC
AGAATAGGGG CGACAAGCGG CAATTCGGGC GAAATCGAAA TAGACGAAAC CCTTACGATA
GAGGGCAAAA CCGGACCCGA CAAAGACATA CTTGACGCAA ACGGTCTGAG CCGCATTTTC
AAAGTGGCAA GCGGCAAAAC GCTCACGCTC AAAAACCTGA CGCTTACAGG CGGCAAGGCA
ACCGGGACAG GCGATGCAGG CTGCGGCGGC GCAATCTTCG CACGAGATGC AAGCGAGATC
AAAATAGAAA ACTGTATCAT TACGGGCAAC GAAGCAGGTA CAAACGGCGG CGGCTTAAAT
GTTGAGGGCA CACCTACTAC CATCACAAAC TGCACCTTTA CGGGAAACAC CGCAAAGAAT
GGCGGCGGCA TCTATATAAT GGAGACTAGC ACTCGCCGCC CTGTGGTAAC AATCAGCGGC
GGCACTATCG GCGGCACGGA AACGGATAAG GCAAACAAAG CAACCGGCAA CGGCGGCGGC
ATCTATGTCG GCGACTGGTG CGAGTTGAGG CTGCAAGATT CTGAAGATCC CGGTGCGCAG
AGCGTACTGA TTATCGGCAA TCAGGCGGCA AAGGGCGGCG GCGTATACGC AAAGAACGTA
TTGCAAGTAA GTATGAAAAA CGGCACACGA ATTGCGGTAA ACAACGATGT GTATTTGGAC
AGCGGTTCAT GGATTCAGGT TGCCGGCGCC TTGTCAAACA ACCCCGCCGC GCGCATTACG
GTACCGAACG GCAAATACCT GCCGAGTACC AAAGTGCTTG ACGGCAATGC TGCACTCTTA
AACTCGGAAC ACGGCAAGTT CGCTGTAACG CCGAAAGGCG ACGAGTATTG GACAGTGGGA
AACGATGGTC GCTTGACAAA GGATAAAGCT GCCATTTTTA ACAATATTAC GAAGGATCAG
ATAGAAGCCG CAAACTCTTC AATGATTTAT GATGAGAATA ATATAATTAC CGACCGCACG
ATATTGCTTG GCAAACTGGT ACTCTATAAA ACAAATCAAG GTAATTACGG CATTATGCAC
GTTACCGAAG TAGACAACAC AACCAACAGC GGCAAAGGAC ATATTAAGTT TAATTCCAAA
ACCTTTAATC AATACGGCGG GGTTCTAAAG ACAAAGACCG ATAAAGTGCT AGAAGGAGGA
GAGTGCTTTC AATTCGAGTA CGGAGGAGAT CCTGGTTCAA AGCTTGATTT TTATCTTCAA
AATAATACCG ATGGGACTAA GTGGTTCAAG CCTTTAAACC TCGCCCGATT TTATATACTG
TCTAATTAA
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| Protein sequence | MRKLLTFLTI LTAAVAVIVL FTACEQFLKD PEDFLSYWAS EAFIKDHSIG AVARPDEAGV
PCVSSSPEVH IMLTVHNPKN FPLVMPTSSE SAGIVEFKEL SQQPTEGTHY VLGQTAPGRL
KLTYKEAFLQ EYEQGSGSLN PTITLKATDG RVFKKTYTFG IKSNTPPPEP AVVLAKQTNA
YPLPSYYVLC IDTKDLVASS AIVNGKYIHD DIAYVTINGT SYNLKMNNAH NGFIEKPATE
SFLENGTGLM AVGSAQLPTA SPWVLYYKTN IKIRDSNPLT TYRITLRDKE GVVSDEAVAT
IAASGPTHTV TFSVEGGTGM LKAEVNGTEI HSGYDVEKGK TVTFTATPAD GWKVKGWTAS
AGTLSVGGTD TTATLTVTDN ATVTVKFKKI TTVNGGDGAW KLLKKVVEIA DPNSTITIDG
RIGATSGNSG EIEIDETLTI EGKTGPDKDI LDANGLSRIF KVASGKTLTL KNLTLTGGKA
TGTGDAGCGG AIFARDASEI KIENCIITGN EAGTNGGGLN VEGTPTTITN CTFTGNTAKN
GGGIYIMETS TRRPVVTISG GTIGGTETDK ANKATGNGGG IYVGDWCELR LQDSEDPGAQ
SVLIIGNQAA KGGGVYAKNV LQVSMKNGTR IAVNNDVYLD SGSWIQVAGA LSNNPAARIT
VPNGKYLPST KVLDGNAALL NSEHGKFAVT PKGDEYWTVG NDGRLTKDKA AIFNNITKDQ
IEAANSSMIY DENNIITDRT ILLGKLVLYK TNQGNYGIMH VTEVDNTTNS GKGHIKFNSK
TFNQYGGVLK TKTDKVLEGG ECFQFEYGGD PGSKLDFYLQ NNTDGTKWFK PLNLARFYIL
SN
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