Gene TDE1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1114 
Symbol 
ID2739530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1148324 
End bp1148995 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content45% 
IMG OID637159988 
ProductTetR family transcriptional regulator 
Protein accessionNP_971722 
Protein GI42526624 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA AAGACGAAAA CAGAGAAAGT CGGCAAGAAG ACAGAGAAAG CCGGCAAAAT 
CAATTGATCG ATGCGGCGAC AACGCTGTTT TTTTCAAAAG GCTATACGAA TACGTCTGTT 
CGGGATATTT TGGATGAGGC AAACGACAGG ACGTCTTCGC CGAGCGTTTT TTATTATTAT 
TTTGAATCGA AGGAAGCAAT TTACCGCGCC GTTTTGCGCC GGTACTCCGA GCGCTATGTA 
AAATCCGTAC AGGATGCAAT CGACACTCAC AAAGACGACG CGCAATCGCT TATGACTCAA 
GTAACGCGCC TGTTTTTAAA AACGGTAAAA GCCGACGCTC ACGGAAAAGA AGCGGCCGCT 
TCGCCGGACA ATCTTTTGTA CTCATTAAAA CTCAAAGAAG AACTGACACA AAAATTTGTT 
GAAGTTTGGG AAATATTTAT CCGCTCACTG GATTGGTACA AAGCGGACGC CGAAACGGTT 
CATAAAACGG CCGTTTTTAT CGCCGGCGGC ATAGGAGAAA TGATGTACGA TTTCGGCTAT 
GTTCACGAAA AAAAAGAAGG CAGCGCCCGA AAACTCATGG ACTGCATGAT TGACTTCTGC 
GCCGGTGCTT TGAACGCTCC GGCTGCGGAA AAAGAAAAAT ATAGGAGGAT TGTGTATGAT 
AACCTTGCAT GA
 
Protein sequence
MPEKDENRES RQEDRESRQN QLIDAATTLF FSKGYTNTSV RDILDEANDR TSSPSVFYYY 
FESKEAIYRA VLRRYSERYV KSVQDAIDTH KDDAQSLMTQ VTRLFLKTVK ADAHGKEAAA 
SPDNLLYSLK LKEELTQKFV EVWEIFIRSL DWYKADAETV HKTAVFIAGG IGEMMYDFGY 
VHEKKEGSAR KLMDCMIDFC AGALNAPAAE KEKYRRIVYD NLA