| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0860 |
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| Symbol | rsuA |
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| ID | 2741371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 881163 |
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| End bp | 881900 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637159733 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | NP_971470 |
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| Protein GI | 42526372 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAACCC GTTTGGATAG AATATTGGCC CTCAGCGGTT TAGGCTCCAG GAGTGATGTA
AAAAAAATGA TACGCAAAAA AAACTGCTGC GTCGACGGGG TGCGTATTGT TTCGCCTTCC
TTTATTTTAG ACACTGACCT AAATAAAATA ACTATAGACG GGGAGCCTCT TGTGTTGAGG
ACAAATGTTT ATCTTATGTT TAATAAGCCG CAAGGCTGCG TAACTTCGAC AAGCGATCCC
GTACACAAAA CCGTAATGGA TTATATAAAA GCTCCCTTTG ACAGGATGAC GCTGTTCCCT
ATCGGCCGGC TGGATATAGA CACTGAAGGC CTTTTGATTA TTACCGATGA CGGCGAGATT
ACCCACAAGA TTACCTCGCC TAAGTCGGGA ACGGTAAAGA CTTATTATCT GGAATTAAGC
CGAGAGCCCT CCGATGAAGA ATTTAAAAAT TACTGTGAAG AGTTTGAAAA AGGAATTGTG
TTAAAAAATG GTTATAAGTG TCTTCCTGCA AAATTCGAAA AATGTGAAAA CAAAACCGGT
TCTTTTAGAA GCGGATTTTT AATGCACATA ACCGAAGGAA AATTCCATCA AGTTAAAAAA
ATGTGCTTAA GCGCAGGGAA CGAACTTTGT TACCTGCGCC GTATTGCAGT CGGTTCAATA
GTTTTAGATG AGACCTTGAA GACCGGAGAA TACCGCGAGC TTTCTGCCGA AGAGATAGAT
TCGCTCAGAG ATTATTGA
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| Protein sequence | MKTRLDRILA LSGLGSRSDV KKMIRKKNCC VDGVRIVSPS FILDTDLNKI TIDGEPLVLR
TNVYLMFNKP QGCVTSTSDP VHKTVMDYIK APFDRMTLFP IGRLDIDTEG LLIITDDGEI
THKITSPKSG TVKTYYLELS REPSDEEFKN YCEEFEKGIV LKNGYKCLPA KFEKCENKTG
SFRSGFLMHI TEGKFHQVKK MCLSAGNELC YLRRIAVGSI VLDETLKTGE YRELSAEEID
SLRDY
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