| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0693 |
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| Symbol | thiD |
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| ID | 2739815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 730082 |
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| End bp | 730891 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637159568 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | NP_971305 |
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| Protein GI | 42526207 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAC TTGCAACAAT TGCCGGATCG GATGCATCCG GAGGGGCCGG CTTGGAAGCC
GACTTAAAAA CATTTCAGGA GTACGGTGTA TATGGAATGG CTGCCGTTAC GGTAATTGCA
ACGATGAATC CCGATAAAGA GTGGGGACAT GAAGTTTTTC CGCTTGATGA GCAAGCTATA
AGAGCCCAGC TTGAAACAAT TTTTAAGGGC ATAGGCGTTA ACGCTGCAAA AACGGGAATG
CTTGCAACAA ATTATGCAGT TGAGCTTTCT GCCGAATACT TAAAAAAATA TAATGTAGAA
AATTATGTAC TGGACCCTGT AATGGTATGT AAGGGCGGAG ACCTTGCCTT AAACCCAGAG
CTCAATAATC TCATTATAAA AAAACTTTTG CCTTTAGCAA AGCTTATTAC GCCGAACCTT
TTTGAAGCTG GGCAGATTGC AAAAATGCCG ACACCTTCTA CAATCGAAGA AATAAAAGAA
GCCTGTAAGA TTATTCACGG AATGGGTGTT CCCTATGTCT TTATAAAGGG CGGACCCAAG
TTGAACGGAG AACAATCGGC TATAGATATT TTTTATGACG GCGAACAATT TTTAAAAGTG
GAAGGCGGGC TCACCGATAC AAGATGGACA CATGGAGCAG GCTGCACAAC AGCTGCTGCC
ATCGCTGCAG GTTTAGGCAT AGGCCTTGAA CCATATGAAG CCGTAAGAAG ATCAAAAAAG
TTTATCACTT TAAGCCTTCA AAACGGATTC CAACTTAATA AATGGGTCGG CCCCGGCAAC
CCTGCCGCAT GGCGGAAGAG CTTTAATTAA
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| Protein sequence | MIKLATIAGS DASGGAGLEA DLKTFQEYGV YGMAAVTVIA TMNPDKEWGH EVFPLDEQAI
RAQLETIFKG IGVNAAKTGM LATNYAVELS AEYLKKYNVE NYVLDPVMVC KGGDLALNPE
LNNLIIKKLL PLAKLITPNL FEAGQIAKMP TPSTIEEIKE ACKIIHGMGV PYVFIKGGPK
LNGEQSAIDI FYDGEQFLKV EGGLTDTRWT HGAGCTTAAA IAAGLGIGLE PYEAVRRSKK
FITLSLQNGF QLNKWVGPGN PAAWRKSFN
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