Gene TDE0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0393 
Symbol 
ID2739402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp443272 
End bp443919 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content30% 
IMG OID637159265 
ProductTetR family transcriptional regulator 
Protein accessionNP_971007 
Protein GI42525909 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAT CCACTTTTTT AAAATTATCC GATGAACGGA AAGAAAAATT ACGTAAAACT 
ATATATAATA TGTTTATAAA AAAAGATTAT GAATCTATTT CGATAAGAGA TTTAGTAAAA 
GAGATGGACA TATCAATAGG GAGTTTTTAT AAATATTTTG ATGATAAGGC GGAAATGTAC 
CTATTTTTCT TCTCTGAGAT AGAAAAAAAA ATTTTTGAAG AGGAAAAAAG GCGGAATGCG 
TCTTTTTTTT ACCCGGCGAA ACTGCTTGAT CTGCATGAAA TTTTGACGCA GGAAGAGATA 
GATTTCAGTA CTTCATGGTT GAATGTTCCC GAAGACGTAC TGTACAAATT TTATTTTAGA 
GGGCATGCAA AGCAGCTTTA CCGCTCAATT CTTGATGAGC TTACCGAAAT GCAGCAAAAG 
GCGCAGCTTA ATCCGAATAT TAAGGCAAAT ATAGCTTACC ACATAATAAT TACCTCAATG 
TTCAGTTTTA TGTTATACAT AAAAGAGAAT AAAATCACGG ATAAGGAAGA TTTCTTTAGT 
AGAAAAACAA CTTATTATCA AACGGTAATT TTACCGGGTA TATTATCCGA AAAATACTAT 
AAGCAAAAAT ATTCTAAAAA TGCAATAAAA AGTGAGATTA TATTATAA
 
Protein sequence
MPKSTFLKLS DERKEKLRKT IYNMFIKKDY ESISIRDLVK EMDISIGSFY KYFDDKAEMY 
LFFFSEIEKK IFEEEKRRNA SFFYPAKLLD LHEILTQEEI DFSTSWLNVP EDVLYKFYFR 
GHAKQLYRSI LDELTEMQQK AQLNPNIKAN IAYHIIITSM FSFMLYIKEN KITDKEDFFS 
RKTTYYQTVI LPGILSEKYY KQKYSKNAIK SEIIL