Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0321 |
Symbol | |
ID | 2739328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 353865 |
End bp | 355184 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637159193 |
Product | CBS domain-containing protein |
Protein accession | NP_970935 |
Protein GI | 42525837 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0241096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC CTCCTCCGCA ATGGTTTTAT ATTTTACTTT TAATTGTTCT ACTTTTTTTA TCGATGATGT TTTCATCGGG AGAAACGGCC TTTTTATCCG TAAATAAATT GAAAATAAAA TATTTACGCG AAAAGAAAAA TAAAAAGGCT GCAAGAGTTG AAAAAATTTT AAAAGATAAA CAAAAGTTTT TAACAACTTC TTTAATCGGA AACAGCTTAG TAAATATTTT AATATCGGTA CTATTAACGG CTTTAATGGT AGAGCTTGTG GGGGCTAAGG GATTAAGCAT TGCAGTCACG GCTGCAACTA TTGCAATTTT AATTTTCGGA GAGATACTTC CTAAATCGAT TGCTTTGGTT TTTTCCGAAC CGATAGCCTT AAAATTTTCA GGCTTTATTT TGTTTTTAAT TAAAGTACTT GCACCTCTTG AATGGCTCTT TTCGGGTTTT ACAAAATTCT TTTTAAAATT TTTAGGTGTG AAAAATCTGC AATCGAATGA GGCCTTAACC GATGCAGACT TAAAAGATTT CTTTGATGTG AGTCAAGAGC ATGGAGATCT TCGCTCGGAA GAAAAAGCCG TCCTCGAAAA AATATTAAGC TACGGCGATA TAACCGTAAA AAATATTATG ACGCCCAGAC CCGATATAAT AGGCCTTACC GCTGATGTAA ACCCTGAAGA AATTATAGAA CTTTCTCATT CTTCAAGGTT TTCAAGGTTT CCGGTTTATG AAGAAGACAT AGATGAAATT ATCGGTATTT TTTATATTAA AGATTTTTTG TTTTCGGAAG CGGCTGCAAA AGATTTCTTA CAAGAATCAA AAGAAAAATT CGATATAAAA AAATATTTAC GTAAGCCTGT TCTTGTTTTT GAAAATACCG AGCTTTCAAA GTTGCAGGAA ATATTTAGAA AAGAAAAGCA GAACATGGTT GTGGTTATCG ACGAGTACGG CGGAACTTTA GGTATTGCAA CTCTTGAAGA TTTAAATGAA GAAATATTCG GGAACATAGC CGATGAATAC GATACGGATG ATGCTGCAGC AGAGGATCCA AATCTTGATA ATATAAATGA TGAAGAAACT CAAAATCTTA GTCAAACCAT TTTAGGCAGC ATGAGGCTGA GCGATTTAAA TGAGAATTTG GGAACTTCAT TTTCTTCCGA GTATTATGAC ACAATAGGCG GCCTTATTAT GGAAAAATGC GGAGAGGTTC CGCAAATAGG TTCCACCATA AAAATAGAAA ACTATAATTT CACGGTTATG AAAACCGAGG GAAACAGAAT AAGCGAACTA CAAGTAAATA TTGCGGGAGA TGAAGAATGA
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Protein sequence | MNEPPPQWFY ILLLIVLLFL SMMFSSGETA FLSVNKLKIK YLREKKNKKA ARVEKILKDK QKFLTTSLIG NSLVNILISV LLTALMVELV GAKGLSIAVT AATIAILIFG EILPKSIALV FSEPIALKFS GFILFLIKVL APLEWLFSGF TKFFLKFLGV KNLQSNEALT DADLKDFFDV SQEHGDLRSE EKAVLEKILS YGDITVKNIM TPRPDIIGLT ADVNPEEIIE LSHSSRFSRF PVYEEDIDEI IGIFYIKDFL FSEAAAKDFL QESKEKFDIK KYLRKPVLVF ENTELSKLQE IFRKEKQNMV VVIDEYGGTL GIATLEDLNE EIFGNIADEY DTDDAAAEDP NLDNINDEET QNLSQTILGS MRLSDLNENL GTSFSSEYYD TIGGLIMEKC GEVPQIGSTI KIENYNFTVM KTEGNRISEL QVNIAGDEE
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