Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0213 |
Symbol | |
ID | 2739370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 248408 |
End bp | 249550 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637159082 |
Product | TPR domain-containing protein |
Protein accession | NP_970829 |
Protein GI | 42525731 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000856086 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAATC CTATCGATTC GCTTTTATAT GTAAAAATAT CGGCTGAACA AGCTGGCAAG ATTTTTGAAA ATCTTGAGTC TTCAATTCCG CTTCCTATTC AATTATCCGA ACCCGGCCAA AAAGAAGATT TTAAGGCCGA AAATATAAAG CCGGAAATGA TTTTAGCCGG AATGCTTACC GTTTTTGCCT ATGACAGGGA AAATCCCCAT ATTACATATT ATCGAAAAAT ATTTAATTTA CTCCGTCCCG ATATCCGTAA AGAAATGACT GAGGCTGCAA TTATCAAAAT CAAAAATAAT GATTTTGATA TGGCTGAAGA GATTTTACTT TCTCTTGAAG GTTTAAATCC GGATGACGGT ATAACCAAAT TAAACCTTGC TCTTTTGATG GAAGAGCGTT CTCAATTCTG TGAGATGAGA GAACTTTTTG AAGATGCTTT GAGCTTTAAT AAAAGAGCCG AAGAGCTTTA TTCAGAGCTT ATACTTTTTG AGCCTCCATT GCCGGGTGTT TTTTTTAATG CTGCATATTT TTTTATAAAA CAGAAAAACT ATATAAAAGC CAAATCCCTT TTAAAAACAT ATTTGGAAAT AGAAAATGAT TCTTCAGAAA CAGCCGAATT CCGAAAAGCT AAGGCTTCCG AGTTGCTTAA AACTATTTCG GAACAAGCTC TTGACGATGA GCTTTTCCAA AAAGCCTATA AATGTATTGA TTTAGGCGAA GAAGAAAAAG CCGCCGAAAG TATAAAGCTT TTTTTGCGAA AAAATCCTAA GGTTTGGAAT GCTTGGTTTT TGTTGGGCTG GGCTTTAAGA CGAATGGGCC GTTGGGAAGA TGCCCGATCT TCTTTTTTAA AAACCATTGA ACTTTTAGAA AATTCCGAAA TTTCAGACAA AGAACCTCTT TGCGATGTTT ACAATGAGCT TGCAATTTGT TTGATGGAGT TAGAACTTTT TGATGAAGCC GAAAAACATC TTATAAATGC CTTGAGTTTA GATTCCGAGA ACATAAAAAT TATTTCCAAT CTTGGCACCC TCGCTCTAAA ACAGGGAAAA CAAGAAGAAG CGGAAGCCTT TTTTAGAACC GTTTTAGAAA TAAATCCTGA CGATAAAATA GCTTTAAATG TTTTGGGTAA ACCTCGGGCA TAA
|
Protein sequence | MQNPIDSLLY VKISAEQAGK IFENLESSIP LPIQLSEPGQ KEDFKAENIK PEMILAGMLT VFAYDRENPH ITYYRKIFNL LRPDIRKEMT EAAIIKIKNN DFDMAEEILL SLEGLNPDDG ITKLNLALLM EERSQFCEMR ELFEDALSFN KRAEELYSEL ILFEPPLPGV FFNAAYFFIK QKNYIKAKSL LKTYLEIEND SSETAEFRKA KASELLKTIS EQALDDELFQ KAYKCIDLGE EEKAAESIKL FLRKNPKVWN AWFLLGWALR RMGRWEDARS SFLKTIELLE NSEISDKEPL CDVYNELAIC LMELELFDEA EKHLINALSL DSENIKIISN LGTLALKQGK QEEAEAFFRT VLEINPDDKI ALNVLGKPRA
|
| |