| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0078 |
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| Symbol | grdB-1 |
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| ID | 2741693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 88835 |
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| End bp | 90166 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637158948 |
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| Product | glycine reductase complex selenoprotein GrdB1 |
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| Protein accession | NP_970695 |
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| Protein GI | 42525597 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01918] selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATATA AGGCTATTCA TTATATAAAT CAGTTTTATG CCGGTATAGG CGGTGAATCA
TCGGCAGACT CCGGTTTTGT TGTTTTGAGA GACAAAAAGG GTCCTGCTAT CGGCTTAGAA
GGCTTATGGC ATGGAAAGAT GATTGTGACA AAAGTTATTT GTTGCGGAGA TAATTATATA
AATCTTGATA GGAATTTTGA AGAAGTATGT AGGCAGCTGA AAAAAATTGT AGAAGAAGAA
AAACCTGATG TCTTAATTGC AGGTCCGGCA TTTAATGCCG GAAGATATGG TATGGCTTGT
GCTAAAATAT GTGACTATGT TCGGAGTAAT CTGAATCTTC CATCTGTTAC GGCTATGTGG
CACGAAAATC CCGCTGTTAA AATATATGTT AGAAATAATT ATATAATAAG CAGCACAGAA
ACTGCTGCGG GGATGCACAA AACATTGCAG GACTTAGCTG ACCTTGCCTT AAAACTTGCT
AAGAAGGAAA AAATAGGTCC TGCCCGTATT GAAGGATATT TACCGACAGG GCATCGCTAT
AATGAATACC ATAAAAAAAC CGGTGCTGAA AGAGTGGTGG ATATGTTGTT GGATAAGTTA
AATGGCCGGC CCTATCAAAC TGAGGTTCCC TTACGGGGGT TTGAGAGAGT TCCTCCTGCT
CCGCCTATTC ATAAAATGAA CAAAACAACT ATAGCATTAT TTACTACCGG CGGATTAGTT
CCTATTGGAA ACCCTGATAA ACTCAAGCAA GCCTTTGCTG AGGATTTTAA AGTCTACGAT
ATTTCTAACC GCGATACCTT GCCGCAAGGG GTATATGAGT CCATTCATGG GGGATATGAT
ACTACAGCAG CATCTGCAGA GCCTAATAGA TTGATTCCCT TAGATGCTTT AAGACAATGT
GAAGCCGAAG GTATTATTGG GGGAATATAT CCTTACTTTG GAACGACATG CGGTGTTGGT
ACAAATGTGG CTGTTAGTGA GTCCATGGGC AAGGCTTGGG CAAGGAAAAT TAAAGAAGAA
GGTGTAGGTG CTGTAATTTT AACTAGTACG TGAGGAACCT GTACACGTTG CGGTGCAACG
ATTTGCAAAG AATTGGATCG TGTCGGTATT CCAAACGTAC ATATAAACGC ATTTACGTCC
ATATCTGAAA GTGTTGGGGC AAACCGAATT GTTTTTGGCG GTGGATTTAC TGCACCTGTA
GGTAATCCTA TGCTCCCTCT TGAACGCGAG ACGGCATACA GACGTAAAAT TGTTGATAAA
GCTTTAGAAG CCTTGCAAAC AGAAGTCTTA TCACCTACTG TTTTCACTGT AGACCATGAT
AAGGAGGGAT AA
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| Protein sequence | MIYKAIHYIN QFYAGIGGES SADSGFVVLR DKKGPAIGLE GLWHGKMIVT KVICCGDNYI
NLDRNFEEVC RQLKKIVEEE KPDVLIAGPA FNAGRYGMAC AKICDYVRSN LNLPSVTAMW
HENPAVKIYV RNNYIISSTE TAAGMHKTLQ DLADLALKLA KKEKIGPARI EGYLPTGHRY
NEYHKKTGAE RVVDMLLDKL NGRPYQTEVP LRGFERVPPA PPIHKMNKTT IALFTTGGLV
PIGNPDKLKQ AFAEDFKVYD ISNRDTLPQG VYESIHGGYD TTAASAEPNR LIPLDALRQC
EAEGIIGGIY PYFGTTCGVG TNVAVSESMG KAWARKIKEE GVGAVILTST UGTCTRCGAT
ICKELDRVGI PNVHINAFTS ISESVGANRI VFGGGFTAPV GNPMLPLERE TAYRRKIVDK
ALEALQTEVL SPTVFTVDHD KEG
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