Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0860 |
Symbol | gspE |
ID | 1246228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 993620 |
End bp | 995122 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637061673 |
Product | general secretion pathway protein E |
Protein accession | NP_297233 |
Protein GI | 15835474 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGA ATAAGTGTTC CATGCAAGAT CTTTTAGATC GCCTTCCTTA CTCCTTTTTA AAGAAAAATT ATCTGCTGCC TATAGATGAC TTAGGGGATA AGATCGTATT GGCGAGGCAT CTGAAAAAGA CTCCTTTGGA GGCTTTGGAT GAAGTGCGGT TGATTATGCA GAAACCCCTT ACCATAGTTT CTAAGGAAGA AACAGAAATT ATTCACGGAT TGCAAAAGCT TTATAGCGAT AAGGAGGGGA AGGCCTCTGA AATGCTACTC TCTATGCAAG ATGGAGAGGC TCAAGAATCT GAAAGTGACA CGACTGAACT TCTTGAGAGC CAAGAGGATA GTGCGCCTGT TGTTCGATTA CTAAATTTGA TTCTTAAAGA AGCTATTGAA GAGCGGGCTT CGGATATTCA TTTTGAGCCA GTAGAGGATC TACTGCGTAT TCGTTACCGT ATTGATGGGG TTCTTCATGA TCGTCATGCT CCTCCCAATC ATCTCAGAAC GGCTCTCATT ACTCGTATTA AGGTGTTGGC TAAACTTGAC ATAGCCGAAC ATCGTTTACC TCAAGATGGG CGCATTAAGT TGCAGTTGGG GGGGCAAGAG ATTGATATGC GTGTCAGTAC AGTCCCTGTG ATTCATGGGG AACGGGTAGT ATTGCGTATA TTAGATAAGC GTAATGTGAT TTTGGACATA CGAGGGTTGT GTATGCTTCC CAAAATGGAA GCTTCTTTTA GAAAAGCAAT TAGTGTCCCT GAAGGTATTT TGTTGGTTAC AGGTCCTACA GGAAGCGGGA AGACCACAAC GTTATATAGT GTTTTACAAC ATCTGTCCGG GCCTTTTACG AATATTATGA CTATTGAAGA TCCTCCGGAG TATAAGCTCC CTGGGATTGC TCAAATTGCT GTAAAACCTA AGATAGGGCT TACCTTTTCC AGAGGGCTTC GTCATTTGTT AAGGCAGGAT CCGGATGTTC TTATGGTTGG AGAAATTCGT GATCAAGAAA CTGCAGAGAT TGCAATTCAA GCAGCTTTAA CAGGGCATTT AGTTGTTACT ACTCTTCATA CTAATGATGC TGTATCCGCG ATACCACGTC TTTTAGATAT GGGGGTCGAG TCTTATTTAT TGTCTGCAAC CATGATAGGA GCTGTTGCTC AACGACTAGT TCGTAGGATT TGCAAGCATT GTAAAGAAAT ATGTGAAGCA GATGTACAAG AACGAGCTTT GCTAAAGGCG TTAGGAAAAG ACCCTTATGC TCCTTTGTAT AAAGGTCGCG GGTGTTCCCA ATGTTTTCGT TCAGGATACA AAGGGAGACA GGGGATTTAT GAGTTTGTCG ATATTACGAC GACCCTTCGC TCTGAAATTG CATTAGGGAA GCCTTATCAT GTTTTGCGAG GCGTAGCAGA GCAAGAGGGA TATCGGCCTT TGCTTGAGCA TGGAGTAGAA CTAGCTCTTG CAGGAGAGAC GACTCTCTCT GAAGTTTTAC GTGTCGCTAA ACGGTCAGAA TAG
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Protein sequence | MAENKCSMQD LLDRLPYSFL KKNYLLPIDD LGDKIVLARH LKKTPLEALD EVRLIMQKPL TIVSKEETEI IHGLQKLYSD KEGKASEMLL SMQDGEAQES ESDTTELLES QEDSAPVVRL LNLILKEAIE ERASDIHFEP VEDLLRIRYR IDGVLHDRHA PPNHLRTALI TRIKVLAKLD IAEHRLPQDG RIKLQLGGQE IDMRVSTVPV IHGERVVLRI LDKRNVILDI RGLCMLPKME ASFRKAISVP EGILLVTGPT GSGKTTTLYS VLQHLSGPFT NIMTIEDPPE YKLPGIAQIA VKPKIGLTFS RGLRHLLRQD PDVLMVGEIR DQETAEIAIQ AALTGHLVVT TLHTNDAVSA IPRLLDMGVE SYLLSATMIG AVAQRLVRRI CKHCKEICEA DVQERALLKA LGKDPYAPLY KGRGCSQCFR SGYKGRQGIY EFVDITTTLR SEIALGKPYH VLRGVAEQEG YRPLLEHGVE LALAGETTLS EVLRVAKRSE
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