Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0423 |
Symbol | ligA |
ID | 1245776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | + |
Start bp | 484203 |
End bp | 486185 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637061223 |
Product | NAD-dependent DNA ligase LigA |
Protein accession | NP_296800 |
Protein GI | 15835041 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCTT TGTCTCAAGA CTATTATATT GCTTTATGTA CAGAGTTGAT AGAGCATGAT CGGCGTTATT ATGTGTTGGA TCGACCTACA ATTTCTGATT ACAGTTATGA TATGAAGATG CGAGAGCTTC AAAAAATAGA AGCTCAACAT CCGGAGTGGA AGGTGCCTTG GTCGCCAACC ATTTATTTGG GAGATCGTCC TTCTGGTCAG TTTCCTGTAG TTCCTCATTC ACATCCTATG GTGTCTATAG CGAATGTGTA CTCTTTAGAG GAATTAGAGG AATTTTTTTC CCGGACAGAA AAGCTGCTTG GTTATTTCCC TACATATTCT TTAGAACTCA AAATTGATGG AATCGCTGTT GCGATTCGTT ATGAAAACAG GACGTTTGCT CAGGCTTTGA GCAGAGGAAA TGGAGTTAAA GGGGAAGATA TTACAGCTAA CGTAAGTACG ATACGTTCTT TGCCTATGAC TCTTCCTCAA GATGCACCAG AAGAGGTAGA GGTTCGAGGA GAGGTATTTC TTTCATACCA GGCTTTTGAG AAGCTCAATA TTTGTCAGCG AGAACAAGGG AAATTAGAAT TTGCGAATCC TCGCAATGCT GCTGGAGGGA CTCTTAAGCT GTTGTCTTCT AGGGAGGCAG CTAAAAGGAA TCTGGACTTA TCCATTTATG GACTCATCAC GAATCGTGAA GAGCATTCTC ACTTTGAAAA TCTTGGTCTA TGTGCTCATT GGGGATTTCC TATCGCAGGC ATGCCTAAAC AGTGCCGCAC GAAAGAAGAG GTTATAGAAC GCATACGAGA AGTTGAAGGA ATGCGATCGC GGCTTCCCAT GGCCATAGAT GGGGTGGTCG TTAAGGTCGA TAGTGTTGCC GAGCAGCATC GTTTAGGATT GACTAGCAAG CATTATCGTT GGGCGATAGC CTACAAATAT GCTCCGGAAA GAGCAGAAAC CATTTTACAA GATATTACCG TGCAGGTTGG TAAAACAGGG ATTTTAACTC CAGTTGCCGA ACTAACTCCC GTTTTGCTGT CTGGGAGCCG AGTGTCTAGA GCATCTCTAT ACAACGAGGA TGAAATAGAG AAGAAGGACA TTCGCATAGG AGATTCTGTT TACGTAGAAA AAGGTGGAGA AATTATCCCT AAAATCGTTG GGATTAATTT AGCTAAGCGT TCTCCTGATA GTAAACCTTG GAAAATGCCA AGCCTATGTC CTATGTGCCA TAATCCAGTC ATTAAAGAAA GAGTGTCTGT TCGTTGTACA AACCCTCTTT GCCTTGGGGG AATGTTAGAA AAGATTTGTT TCTTTGCAAG TAAGGGAGCT TTGAATATTG ATCATTTAGG CGAGAAGGTT ATAGCCAAAT TATTTGAAAT GGGGCTGATT CGTTCTTGTT CCGATGTGTT TGCGCTTACA GAAAATGATT TGAAGCAGGT TCCAGGATTT AAGGACCGTT CTGTCCACAA TTTATTAGCG AGTATTGCAG GAGCCAAAGA AGTGACTTTG GATCGATTTT TGACAGCGCT TTCCATACCT TTTGTAGGGA GTTCTGGGGC TATAGCTCTA GCGGACCATT TTGGAACTTT AGATAAAGTA ATGAAAGCTT CCTTGGATGA ATTACTCTCT ATAGAAGGTA TTGGTCAAAA AGTTGCAGCG TCTATCATAG ATTTCTTTTC TAAAACTGAG AATGTAGAAG AGATTTGTCG TATGCAAGAG TTGGGGGTTC GCATTCTTCC TAAACAGGTA GATAGATGGG CCCCTTTACA GGGTAAGATT TTTGTTCTTA CAGGGACTCT TCAGGAGATG ACGCGATTAC AAGCCGAGGA GCGTATTCGT TCGTTAGGAG GAAAGATTAG TTCTTCTGTA TCGAAGAATA CCTATGCTGT AGTTGTGGGA AGAGAAGCTG GGTCTAAGTT AAAAAAAGCT CAGGAATTAG GGGTGCAGGT TCTAGAAGAA AGTGATTTGT TAAAAATTCT TAATCAAAAC TAG
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Protein sequence | MRALSQDYYI ALCTELIEHD RRYYVLDRPT ISDYSYDMKM RELQKIEAQH PEWKVPWSPT IYLGDRPSGQ FPVVPHSHPM VSIANVYSLE ELEEFFSRTE KLLGYFPTYS LELKIDGIAV AIRYENRTFA QALSRGNGVK GEDITANVST IRSLPMTLPQ DAPEEVEVRG EVFLSYQAFE KLNICQREQG KLEFANPRNA AGGTLKLLSS REAAKRNLDL SIYGLITNRE EHSHFENLGL CAHWGFPIAG MPKQCRTKEE VIERIREVEG MRSRLPMAID GVVVKVDSVA EQHRLGLTSK HYRWAIAYKY APERAETILQ DITVQVGKTG ILTPVAELTP VLLSGSRVSR ASLYNEDEIE KKDIRIGDSV YVEKGGEIIP KIVGINLAKR SPDSKPWKMP SLCPMCHNPV IKERVSVRCT NPLCLGGMLE KICFFASKGA LNIDHLGEKV IAKLFEMGLI RSCSDVFALT ENDLKQVPGF KDRSVHNLLA SIAGAKEVTL DRFLTALSIP FVGSSGAIAL ADHFGTLDKV MKASLDELLS IEGIGQKVAA SIIDFFSKTE NVEEICRMQE LGVRILPKQV DRWAPLQGKI FVLTGTLQEM TRLQAEERIR SLGGKISSSV SKNTYAVVVG REAGSKLKKA QELGVQVLEE SDLLKILNQN
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