Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0409 |
Symbol | |
ID | 1245760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 469767 |
End bp | 471044 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637061207 |
Product | hypothetical protein |
Protein accession | NP_296786 |
Protein GI | 15835027 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.521207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCGCC CTTTGTCTTT TCTTAAAAAG CTTCACCATG CCTTTCGCAA CAATTTCATT ATCAAATCTT TTCTAAAAGC TCCTAAAGTT CTTTACTACA ATGAGGCCTC TAAAGAAGCC TGCATTCTAA GTTACTATGG TCTTTTTAGT TGCATTCCTA TACTGGTCTT CTTTCTAAGA CTTTCTCAAT ATTTGTTCAT TAGCTTGGAC TGGAAAGAAT GGCTATTGCT CCATTACCCT GATTACGAAA CTCCTATTCT AGCTATTTTT GAAGCAGCTT ATTCAACAAC AAGCAGCATC GTAGTCGTTC TGGTCAGTAG TTTTTTTGTT TTTTGTTGGG CTGGAATTCT CATGCTGCAA TCTTTAGAAG ATGGCCTGAA TAAAATATTC TGCCCAGGAA TCACACAAGC CTCTTTAAAA AGACTCATTA GCTACTTAAT TATTACCCTT ATTAGCCCCA TGATCTTCAT CATTGTTTGC GGATCTTGGA TCTATATCAC ACAAATCATG CCTATTAGTT ACCCCAAGCT ATTTAGTTTT AGCCATGCCA TGGCCTGCAT TTATGTGATT TCGCGAATAC TACCTTATGC CCTACTTTAT GGTGGCCTGT TTTGCTGCTA TGCATTTCTC CCCAGAGTTC CCACACAAAA ATCCTCGTCT CTTTTGGCCG CAGCCATAGC TGGTAGTGCC TGGGTAATCT CTCAGAAAAT TTTCTTTTGC CTGCAACTCT ATATTTTCAA CTATAGCTTT ACTTATGGAG CCCTAGTTGC TTTACCCTCC TTCCTCCTTC TTCTCTATCT TTACTCTATT ATTTATTTGT TCGGAGGAGC ATTGTCCTTC CTCTTTCAAA ATAAAGGATT TATCACTCTA ATTCCGAAAG AGGAGATTTT TCCTAATAGC TACTTCAAAT TCATTTTATG TCTGTATTTT CTGACTCTTA TTACAGAGCA TTTCGATCAC TCCCTCCCCC CTCCAAGCTC CAGTTACCTT GCTAAAAGAG CTAAAGCTTC TATTGGAGAA GCTTCCCAAT GTCTAGATAT CCTAGAAAAA GAGGGTATGA TCCTAAAACA CAAAGACGGT TATAAGCCCT CCCATAACAT TTCTAACTTG CATATAGATG CTATCTTTGT CCTTTTAACA AAATCTCCCT CGTTCGCGAA CATCTGCTCT TCCTCTCTAA TGCCTATACA AGAAAACCTT GCTCATATAC TAGCAGAGAT CAAAAAGAGC TCGCATAACC TCTCTCTTTC AGAAATTGCT AAAAAAGTGA ATTCATGA
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Protein sequence | MLRPLSFLKK LHHAFRNNFI IKSFLKAPKV LYYNEASKEA CILSYYGLFS CIPILVFFLR LSQYLFISLD WKEWLLLHYP DYETPILAIF EAAYSTTSSI VVVLVSSFFV FCWAGILMLQ SLEDGLNKIF CPGITQASLK RLISYLIITL ISPMIFIIVC GSWIYITQIM PISYPKLFSF SHAMACIYVI SRILPYALLY GGLFCCYAFL PRVPTQKSSS LLAAAIAGSA WVISQKIFFC LQLYIFNYSF TYGALVALPS FLLLLYLYSI IYLFGGALSF LFQNKGFITL IPKEEIFPNS YFKFILCLYF LTLITEHFDH SLPPPSSSYL AKRAKASIGE ASQCLDILEK EGMILKHKDG YKPSHNISNL HIDAIFVLLT KSPSFANICS SSLMPIQENL AHILAEIKKS SHNLSLSEIA KKVNS
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