Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0373 |
Symbol | rpsA |
ID | 1245725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 435054 |
End bp | 436766 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637061173 |
Product | 30S ribosomal protein S1 |
Protein accession | NP_296751 |
Protein GI | 161579046 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0107492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAC AAGCTGATTA TACTTGGGGA GCAAAAAAGA ATCTCGACAC GATAGCTTGC TTACCAGAAG ACGTTAAACA ATTTAAAGAC CTTCTTTACG CGATGCATGG CTTCACCGCG ACAGAAGAAG AACCCACTAG CGAAGTACAG CCTGGTGCGA TCCTAAAAGG TACAGTTGTC GACATAAGCA AAGATTTTGT CGTGGTTGAC GTTGGATTAA AATCTGAAGG AGTCATCCCG ATGTCGGAGT TTATTGACTC TTCAGAAGGT TTGTCCGTCG GAGCTGAGGT TGAAGTTTAT TTGGACCAAA CTGAAGACGA AGAAGGAAAG GTCGTCCTGT CCAGAGAAAA GGCAACAAGA CAACGTCAAT GGGAATACAT TCTTGCTCAT TGTGAAGAAG GCTCGATTGT TAAAGGACAA ATCACTCGAA AAGTCAAAGG TGGCTTAATT GTTGATATTG GTATGGAAGC TTTCCTTCCA GGGTCTCAAA TCGACAATAA AAAAATTAAA AACTTGGATG ACTACGTAGG GAAAGTTTGT GAATTCAAGA TTCTCAAAAT TAACGTAGAT CGCAGAAATG TTGTTGTGTC TAGAAGAGAA CTTCTGGAAG CTGAACGCAT TTCTAAGAAA GCTGAGTTGA TTGAGCAAAT CACAATCGGA GAACGTCGTA AAGGTATCGT CAAAAACATT ACTGACTTTG GAGTTTTCTT AGATCTCGAT GGTATCGATG GGCTGCTTCA TATCACAGAT ATGACATGGA AACGTATCCG TCACCCTTCT GAAATGGTTG AACTCAACCA AGAATTGGAA GTAATCATCC TCAGCGTGGA TAAAGAGAAA GGTCGTGTAG CTCTTGGTCT GAAGCAAAAA GAACACAATC CTTGGGAAGA TATCGAGAAG AAATACCCTC CAGGAAAACG TGTTCGTGGA AAAATTGTTA AACTTCTCCC TTATGGAGCA TTTATTGAAA TTGAGGAAGG TATTGAAGGC CTCATTCACG TTTCAGAGAT GTCTTGGGTT AAAAACATCG TTGATCCTAA CGAAGTTGTA AATAAAGGTG ATGAGGTCGA AGTAGTCGTT CTCTCTATTC AAAAAGATGA AGGGAAAATT TCTCTCGGCT TGAAACAAAC AGAACATAAT CCTTGGGATA ATATTGAAGA AAAATATCCT ATTGGATTGC GTGTGACAGC AGAAATTAAA AATCTAACAA ATTATGGAGC TTTCGTTGAA TTAGAGCCCG GAATCGAAGG ATTAATTCAC ATTTCTGATA TGAGTTGGAT TAAAAAGGTT TCTCATCCTT CCGAACTTTT CAAAAAAGGA AATACTGTCG AGGCTGTTAT TTTGTCCGTA GACAAGGAAA GTAAAAAAAT CACTTTAGGC GTAAAACAAT TGACTCCTAA TCCATGGGAT GAGATTGAAG CTATGTTCCC TGTCGGAAGC GATATCTCCG GTATAGTAAC TAAAATTACA GCTTTCGGAG CTTTCGTTGA ATTGCAAAAT GGTATCGAAG GACTGATTCA CGTATCCAAA CTTTCTGATA AACCTTTTGC TAAAATTGAA GATATTCTCT CTATCGGAGA CAAGGTTTCT GCTAAGGTTA TCAAGCTAGA TCCTGATCAC AAGAAAGTTT CTCTTTCCAT TAAAGAGTTC CTTGCTCATG GAGGACATGC TGGTCAAGAT GCAGAAGAAG AAACATCTTC TAACAGAGAC TAG
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Protein sequence | MPKQADYTWG AKKNLDTIAC LPEDVKQFKD LLYAMHGFTA TEEEPTSEVQ PGAILKGTVV DISKDFVVVD VGLKSEGVIP MSEFIDSSEG LSVGAEVEVY LDQTEDEEGK VVLSREKATR QRQWEYILAH CEEGSIVKGQ ITRKVKGGLI VDIGMEAFLP GSQIDNKKIK NLDDYVGKVC EFKILKINVD RRNVVVSRRE LLEAERISKK AELIEQITIG ERRKGIVKNI TDFGVFLDLD GIDGLLHITD MTWKRIRHPS EMVELNQELE VIILSVDKEK GRVALGLKQK EHNPWEDIEK KYPPGKRVRG KIVKLLPYGA FIEIEEGIEG LIHVSEMSWV KNIVDPNEVV NKGDEVEVVV LSIQKDEGKI SLGLKQTEHN PWDNIEEKYP IGLRVTAEIK NLTNYGAFVE LEPGIEGLIH ISDMSWIKKV SHPSELFKKG NTVEAVILSV DKESKKITLG VKQLTPNPWD EIEAMFPVGS DISGIVTKIT AFGAFVELQN GIEGLIHVSK LSDKPFAKIE DILSIGDKVS AKVIKLDPDH KKVSLSIKEF LAHGGHAGQD AEEETSSNRD
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