Gene TC0348 details

Gene Information

• Locus tag: TC0348
• Symbol: smpB
• ID: 1245701
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 411659
• End bp: 412114
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637061149
• Product: SsrA-binding protein
• Protein accession: NP_296726
• Protein GI: 15834967
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTTA AGGAAATTGT TTCGAATCGC AAAGCCTTTC ACAACTATGA AGTGTTAGAG 
ACGTTTGACG CTGGGATCGT TTTAACTGGA ACAGAAATCA AATCTTTACG AGATCATGGT 
GGAAATTTAG GGGATGCTTA CGTAACGATC TCAAAAGGAG AAGCTTGGCT ACTACAGTCA 
AGTATAGCGC CTTATCGCTT TGGGAATATT AACAACCATG AAGAGCGTCG TAAGCGCAAG 
CTTCTTTTAC ATAAGTATGA ACTTCAAAAG TTGGATTCAC GAGTTTCTCA AAAAGGGTTA 
ACGATCATAC CTCTTAGCTT CTTCTTCTCT AAAGGTTTTG TTAAAGTGCG TATTGGCTGT 
TGTCGAGGGA AAAAATCCCA CGATAAGCGT CAGGCACTCA TTGAACGAGA AAAGAATCGT 
GAATTAGCTG CCGCTATGAA GCGTTCTTAT CGGTAA 

 

Protein sequence

MSVKEIVSNR KAFHNYEVLE TFDAGIVLTG TEIKSLRDHG GNLGDAYVTI SKGEAWLLQS 
SIAPYRFGNI NNHEERRKRK LLLHKYELQK LDSRVSQKGL TIIPLSFFFS KGFVKVRIGC 
CRGKKSHDKR QALIEREKNR ELAAAMKRSY R