Gene TC0140 details

Gene Information

• Locus tag: TC0140
• ID: 1245674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 171639
• End bp: 172370
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637060936
• Product: hypothetical protein
• Protein accession: NP_296519
• Protein GI: 15834760
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1388] FOG: LysM repeat

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.47781
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGTA GAAACACGAT GATTGTAGCA GCTTCTGTGA ATGCAGTACT CTTGGCAGTG 
CTGTTTATGA CAGCACGCTA TTCAGAGCAA GAGGTAGAGT ATTCGCAGAA AATAGCACCT 
ATTAAAATTT TAGAGCCGGT ACCAGTTGTT GAGAAGGCTC CTGAAAAATT AGAAAAAAAT 
CCAGAAGTGA TCGCTAAGCC CGCACAGGTT GTGAGAAATC CTGTAGTCTC TAAAGCGGAG 
CTTGCTGCGC AATTCACAGA TAAAAATCAA ACTGTTGAGA AAGAGATCAA AGTCTCTCCT 
AAAGCGACGC CTCCTCCTGT GGTTGTTGAA TCTCCTACAT CCGAAATTCC TGTTGTGCAG 
GAAAAAAGTG CAGACAAACC TGCAGAGCAA GAAGAATTTT CTACAGTTAT TGTTAAGAAG 
GGAGATTTTT TAGAGCGAAT TGCTAGATCC CATCACACTA CAGTTTCTGC ATTGATGCAA 
CTTAATGATT TGTCGTCGAC GCAATTACAA ATAGGACAAG TTTTACGCGT TCCTAAAACG 
AATAAGACAG AGAAAGATCT TCAAGTTAAG ACCCCCAATC CAGAAGATTA TTATGTGATT 
AAAGAAGGGG ATAGTCCTTG GGCTATAGCT TTGAGTAATG GGATTCGATT AGATGAATTG 
TTGAAATTGA ATGGATTAGA TGAGCAGAAA GCTCGTAAGT TGCGTCCTGG AGATAGATTA 
CGAATTCGAT AG 

 

Protein sequence

MNRRNTMIVA ASVNAVLLAV LFMTARYSEQ EVEYSQKIAP IKILEPVPVV EKAPEKLEKN 
PEVIAKPAQV VRNPVVSKAE LAAQFTDKNQ TVEKEIKVSP KATPPPVVVE SPTSEIPVVQ 
EKSADKPAEQ EEFSTVIVKK GDFLERIARS HHTTVSALMQ LNDLSSTQLQ IGQVLRVPKT 
NKTEKDLQVK TPNPEDYYVI KEGDSPWAIA LSNGIRLDEL LKLNGLDEQK ARKLRPGDRL 
RIR