Gene TBFG_13195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13195 
Symbol 
ID5223883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3555261 
End bp3555968 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID640607963 
Productshort chain dehydrogenase 
Protein accessionYP_001289122 
Protein GI148824368 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones389 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones203 
Fosmid unclonability p-value0.433482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAC TAGCCGAGCG GACCGTGCTC GTCACCGGCG CCAACCGCGG CATGGGCCGC 
GAATACGTCG CTCAGCTTCT CGGTCGCAAA GTGGCAAAGG TCTATGCCGC TACCCGCAAC
CCGCTGGCAA TCGACGTTAG CGATCCGCGC GTGATTCCGC TCCAACTCGA CGTCACCGAC
GCGGTGTCGG TCGCCGAGGC AGCCGACTTA GCAACCGATG TCGGCATTCT GATCAACAAT
GCCGGCATCT CCCGGGCGTC CTCGGTGCTC GACAAGGACA CATCCGCGCT TCGCGGCGAG
CTGGAGACGA ACCTGTTCGG ACCGCTCGCG CTGGCCTCCG CGTTCGCCGA CCGCATCGCC
GAGAGATCCG GTGCCATCGT CAACGTTTCC TCGGTACTCG CCTGGCTTCC CCTTGGCATG
AGCTATGGAG TGTCCAAGGC GGCGATGTGG AGCGCGACGG AGTCGATGCG TATCGAGCTG
GCGCCGCGCG GTGTGCAGGT GGTGGGCGTC TACGTGGGGC TGGTCGACAC CGACATGGGT
CGATTCGCCG ACGCGCCGAA GTCCGATCCT GCCGATGTGG TCCGCCAGGT GCTCGACGGA
ATAGAGGCTG GCAAGGAGGA CGTGCTGGCC GACGAGATGA GCCGTCAGGT GCGCGCGTCG
CTGAATGTCC CTGCGCGGGA ACGTATCGCG CGGTTGATGG GTAACTGA
 
Protein sequence
MTSLAERTVL VTGANRGMGR EYVAQLLGRK VAKVYAATRN PLAIDVSDPR VIPLQLDVTD 
AVSVAEAADL ATDVGILINN AGISRASSVL DKDTSALRGE LETNLFGPLA LASAFADRIA
ERSGAIVNVS SVLAWLPLGM SYGVSKAAMW SATESMRIEL APRGVQVVGV YVGLVDTDMG
RFADAPKSDP ADVVRQVLDG IEAGKEDVLA DEMSRQVRAS LNVPARERIA RLMGN