| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12996 |
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| Symbol | ddl |
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| ID | 5223682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3348505 |
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| End bp | 3349626 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640607762 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_001288925 |
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| Protein GI | 148824171 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 282 |
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| Plasmid unclonability p-value | 0.00428062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 220 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCTA ACGACCGGCG TGATCGGCGT GTCCGCGTTG CCGTCGTGTT CGGCGGGCGC
AGCAACGAGC ACGCCATCTC GTGTGTGTCC GCCGGCAGCA TCCTGCGCAA CCTGGACTCG
CGGCGGTTCG ACGTGATCGC GGTGGGTATC ACCCCGGCAG GTTCGTGGGT GCTCACCGAC
GCCAACCCCG ACGCCCTGAC GATCACCAAC CGGGAGCTTC CTCAGGTCAA ATCAGGATCG
GGCACCGAGC TGGCGCTGCC GGCCGATCCG CGGCGTGGTG GCCAGTTGGT GTCGCTGCCG
CCCGGGGCCG GCGAGGTTCT GGAGTCGGTC GACGTGGTGT TCCCGGTACT GCACGGCCCG
TACGGCGAGG ACGGCACGAT CCAGGGACTG CTCGAACTCG CCGGGGTGCC CTACGTGGGC
GCCGGTGTGC TGGCCAGTGC CGTCGGCATG GACAAGGAGT TCACCAAGAA GCTGCTCGCC
GCCGATGGAC TTCCGGTGGG TGCGTACGCG GTGCTGCGTC CGCCGCGGTC GACACTGCAC
CGCCAGGAGT GCGAACGGCT GGGCTTACCG GTGTTCGTCA AACCCGCCCG AGGCGGCTCG
TCGATCGGTG TTAGCCGGGT GTCGAGTTGG GATCAACTGC CCGCCGCGGT CGCGCGGGCC
CGCCGGCATG ACCCTAAGGT CATCGTCGAG GCCGCGATCA GCGGCCGCGA GCTGGAATGC
GGTGTGCTCG AAATGCCGGA CGGCACACTG GAAGCCAGCA CGCTGGGGGA GATCCGGGTG
GCCGGGGTGC GGGGACGCGA GGACTCTTTC TACGACTTCG CAACCAAGTA TCTCGACGAC
GCAGCCGAAT TGGACGTGCC CGCCAAGGTC GATGACCAGG TCGCAGAGGC GATTCGTCAG
CTGGCGATCC GGGCGTTCGC GGCTATCGAC TGCCGGGGTC TGGCCAGGGT GGACTTCTTC
CTCACCGACG ACGGTCCGGT GATCAACGAG ATCAACACGA TGCCGGGATT CACCACGATC
TCGATGTACC CGCGGATGTG GGCGGCCAGC GGTGTCGACT ATCCGACCCT GCTGGCGACG
ATGATCGAGA CGGCATTGGC CCGCGGCGTG GGCCTGCACT AG
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| Protein sequence | MSANDRRDRR VRVAVVFGGR SNEHAISCVS AGSILRNLDS RRFDVIAVGI TPAGSWVLTD
ANPDALTITN RELPQVKSGS GTELALPADP RRGGQLVSLP PGAGEVLESV DVVFPVLHGP
YGEDGTIQGL LELAGVPYVG AGVLASAVGM DKEFTKKLLA ADGLPVGAYA VLRPPRSTLH
RQECERLGLP VFVKPARGGS SIGVSRVSSW DQLPAAVARA RRHDPKVIVE AAISGRELEC
GVLEMPDGTL EASTLGEIRV AGVRGREDSF YDFATKYLDD AAELDVPAKV DDQVAEAIRQ
LAIRAFAAID CRGLARVDFF LTDDGPVINE INTMPGFTTI SMYPRMWAAS GVDYPTLLAT
MIETALARGV GLH
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