Gene TBFG_12956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12956 
Symbol 
ID5223642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3296543 
End bp3299305 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content66% 
IMG OID640607722 
Producttransmembrane transport protein mmpL7 
Protein accessionYP_001288885 
Protein GI148824131 
COG category[R] General function prediction only 
COG ID[COG2409] Predicted drug exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones238 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones200 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGTC CGGCTGGCCG TCTACACAGA ATTCGGTATA TCCGTTTGAA AAAGTCCTCC 
CCGGACTGCC GCGCCACCAT CACCAGCGGG TCAGCCGACG GTCAGCGAAG GTCACCCCGG
CTCACCAACC TGCTCGTCGT CGCCGCCTGG GTTGCCGCGG CGGTGATCGC AAATCTGCTT
CTCACGTTCA CGCAAGCAGA ACCGCACGAC ACCAGCCCGG CGCTGCTGCC ACAAGATGCC
AAGACAGCCG CCGCCACCAG CCGGATTGCG CAGGCTTTCC CCGGCACCGG TAGCAACGCT
ATCGCCTATC TCGTCGTGGA AGGCGGCAGC ACGCTTGAGC CGCAGGACCA GCCTTACTAC
GACGCCGCCG TCGGTGCCCT GCGCGCCGAC ACCCGCCACG TGGGATCCGT CCTCGACTGG
TGGTCAGATC CCGTCACCGC CCCGCTGGGA ACCAGCCCCG ACGGCCGCTC CGCTACGGCC
ATGGTGTGGC TGCGGGGCGA GGCGGGCACC ACCCAAGCTG CCGAATCCCT CGATGCCGTC
CGATCGGTGC TGCGCCAGTT ACCGCCCAGT GAGGGGCTTC GCGCCAGCAT CGTGGTCCCG
GCAATCACCA ACGACATGCC GATGCAGATA ACCGCCTGGC AGAGCGCGAC GATCGTGACC
GTTGCGGCGG TGATCGCCGT CCTACTGCTG CTGCGGGCGC GCCTGTCGGT GCGGGCCGCG
GCGATCGTGC TGCTGACCGC GGACTTGTCG CTTGCGGTGG CCTGGCCGCT GGCCGCGGTG
GTGCGGGGAC ACGATTGGGG AACCGATTCG GTATTTTCTT GGACGCTGGC CGCGGTCCTG
ACGATCGGAA CCATCACCGC AGCCACCATG CTGGCCGCGC GGCTCGGGTC CGACGCAGGT
CATTCGGCCG CGCCCACATA CCGCGACAGC CTGCCCGCGT TCGCCCTGCC CGGGGCGTGT
GTCGCCATAT TCACCGGCCC GCTGCTGCTG GCCCGAACCC CAGCGCTGCA CGGAGTTGGC
ACTGCCGGGC TAGGTGTCTT TGTGGCACTT GCGGCTTCGT TGACGGTGCT GCCTGCCCTG
ATCGCGCTTG CCGGAGCGTC ACGGCAGTTA CCGGCACCAA CCACGGGTGC CGGCTGGACA
GGCCGGTTGT CGCTACCCGT CTCTTCTGCT TCGGCCCTGG GCACAGCGGC AGTGCTGGCG
ATCTGCATGC TACCCATCAT CGGGATGCGG TGGGGTGTGG CCGAGAACCC GACAAGGCAA
GGCGGCGCAC AAGTCCTTCC GGGGAATGCG CTTCCCGATG TGGTGGTGAT CAAATCCGCT
CGGGACCTGA GGGACCCAGC CGCGCTCATC GCCATCAACC AGGTCAGCCA CCGTCTGGTG
GAGGTTCCCG GTGTGCGCAA GGTGGAGTCG GCGGCATGGC CGGCCGGTGT CCCGTGGACC
GACGCCTCGC TCAGTTCCGC GGCCGGCAGG CTCGCCGACC AGCTGGGTCA GCAGGCCGGA
TCGTTCGTGC CGGCGGTGAC TGCGATCAAA TCGATGAAGT CCATAATCGA ACAGATGAGC
GGCGCGGTCG ACCAACTGGA CAGCACCGTG AACGTGACTC TCGCCGGGGC AAGGCAAGCA
CAGCAATACC TCGATCCCAT GCTCGCCGCC GCGCGGAACC TCAAAAACAA AACCACCGAA
CTGTCGGAAT ACCTGGAAAC GATCCACACC TGGATTGTCG GCTTCACAAA CTGCCCCGAC
GACGTCCTGT GCACGGCCAT GCGCAAGGTC ATTGAACCCT ACGACATCGT GGTCACCGGC
ATGAACGAGC TGTCCACTGG CGCCGACCGC ATCTCCGCGA TATCGACACA GACAATGAGC
GCGTTGTCCT CGGCACCGCG GATGGTGGCG CAGATGCGGT CGGCGCTAGC ACAGGTGCGC
TCGTTCGTAC CCAAGCTGGA AACAACCATC CAGGACGCCA TGCCGCAAAT AGCGCAGGCG
TCGGCGATGC TGAAGAATCT CAGCGCCGAT TTCGCCGATA CCGGTGAGGG CGGCTTCCAC
CTGTCCAGGA AGGACCTGGC GGACCCGTCG TACCGGCACG TACGGGAATC GATGTTCTCG
TCAGACGGAA CCGCCACCCG GCTGTTCCTC TATTCTGACG GACAACTGGA CCTTGCTGCG
GCAGCACGCG CGCAGCAGCT CGAGATCGCC GCGGGCAAGG CGATGAAATA CGGAAGCCTG
GTCGACAGCC AGGTCACGGT GGGTGGGGCC GCGCAAATAG CCGCGGCTGT CCGCGATGCC
CTCATCCACG ATGCTGTGCT ACTGGCCGTT ATCTTGCTCA CGGTAGTGGC TCTGGCCAGC
ATGTGGCGCG GTGCCGTCCA CGGTGCTGCG GTTGGCGTGG GTGTGCTGGC CTCTTACCTC
GCCGCCCTGG GGGTCTCGAT TGCACTGTGG CAACACCTAC TGGATCGCGA GCTCAACGCC
TTGGTCCCGC TGGTGTCGTT CGCCGTCCTC GCTTCGTGCG GCGTCCCGTA TCTCGTTGCC
GGCATCAAAG CCGGTCGTAT CGCCGACGAG GCAACGGGTG CGCGGTCCAA GGGGGCGGTA
TCCGGGCGGG GAGCGGTTGC GCCGCTTGCG GCGCTCGGTG GCGTATTCGG CGCTGGCCTG
GTGCTGGTGT CGGGAGGTTC CTTCAGCGTG CTCAGTCAGA TTGGCACGGT TGTTGTGCTC
GGTCTGGGCG TGCTGATCAC GGTGCAGCGA GCGTGGCTTC CGACCACGCC AGGGCGGCGT
TGA
 
Protein sequence
MPSPAGRLHR IRYIRLKKSS PDCRATITSG SADGQRRSPR LTNLLVVAAW VAAAVIANLL 
LTFTQAEPHD TSPALLPQDA KTAAATSRIA QAFPGTGSNA IAYLVVEGGS TLEPQDQPYY
DAAVGALRAD TRHVGSVLDW WSDPVTAPLG TSPDGRSATA MVWLRGEAGT TQAAESLDAV
RSVLRQLPPS EGLRASIVVP AITNDMPMQI TAWQSATIVT VAAVIAVLLL LRARLSVRAA
AIVLLTADLS LAVAWPLAAV VRGHDWGTDS VFSWTLAAVL TIGTITAATM LAARLGSDAG
HSAAPTYRDS LPAFALPGAC VAIFTGPLLL ARTPALHGVG TAGLGVFVAL AASLTVLPAL
IALAGASRQL PAPTTGAGWT GRLSLPVSSA SALGTAAVLA ICMLPIIGMR WGVAENPTRQ
GGAQVLPGNA LPDVVVIKSA RDLRDPAALI AINQVSHRLV EVPGVRKVES AAWPAGVPWT
DASLSSAAGR LADQLGQQAG SFVPAVTAIK SMKSIIEQMS GAVDQLDSTV NVTLAGARQA
QQYLDPMLAA ARNLKNKTTE LSEYLETIHT WIVGFTNCPD DVLCTAMRKV IEPYDIVVTG
MNELSTGADR ISAISTQTMS ALSSAPRMVA QMRSALAQVR SFVPKLETTI QDAMPQIAQA
SAMLKNLSAD FADTGEGGFH LSRKDLADPS YRHVRESMFS SDGTATRLFL YSDGQLDLAA
AARAQQLEIA AGKAMKYGSL VDSQVTVGGA AQIAAAVRDA LIHDAVLLAV ILLTVVALAS
MWRGAVHGAA VGVGVLASYL AALGVSIALW QHLLDRELNA LVPLVSFAVL ASCGVPYLVA
GIKAGRIADE ATGARSKGAV SGRGAVAPLA ALGGVFGAGL VLVSGGSFSV LSQIGTVVVL
GLGVLITVQR AWLPTTPGRR