Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12931 |
Symbol | |
ID | 5223617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3237892 |
End bp | 3239772 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640607697 |
Product | hypothetical protein |
Protein accession | YP_001288860 |
Protein GI | 148824106 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 247 |
Plasmid unclonability p-value | 0.129963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 195 |
Fosmid unclonability p-value | 0.499246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGAGTAA CCCGCCTGGT GGACGCAGAG TCAACACGAT GCGACGTCGG ACCTGCGCCG AAAAGCGTTG CCATGCTACA TTTCACCGCC GCCACCTCAC GGTTCCGGCT GGGGAGGGAG CGGGCAAATT CGGTCCGTAG CGACGGGGGG TGGGGAGTCT TGCAGCCGGT CAGCGCGACC TTCAACCCTC CGTTGCGGGG TTGGCAGCGC CGGGCGCTGG TGCAGTACCT GGGCACCCAG CCGCGGGATT TCCTCGCGGT GGCCACTCCC GGATCTGGCA AGACATCGTT CGCGCTGCGG ATCGCAGCCG AACTACTCCG TTACCACACT GTCGAGCAGG TCACCGTCGT CGTGCCCACA GAGCACCTCA AGGTGCAGTG GGCGCATGCT GCGGCAGCAC ACGGCCTTTC CCTTGACCCA AAGTTCGCCA ACTCCAATCC GCAGACCTCA CCGGAGTATC ACGGCGTAAT GGTCACCTAC GCCCAGGTCG CTTCGCATCC CACGCTGCAC CGAGTGCGTA CCGAAGCGCG CAAGACGTTG GTGGTCTTCG ACGAGATCCA CCACGGCGGC GACGCCAAGA CCTGGGGAGA CGCCATCCGG GAAGCTTTCG GTGACGCCAC CCGCCGCCTT GCCCTGACGG GTACACCGTT TCGCAGCGAC GACAGCCCAA TCCCGTTCGT CAGCTACCAG CCCGACGCGG ATGGCGTGCT GCGTTCTCAG GCTGACCACA CCTACGGCTA TGCGGAAGCC CTCGCTGACG GTGTCGTCCG GCCGGTGGTC TTCCTCGCCT ATTCGGGGCA GGCGCGCTGG CGGGACAGCG CCGGCGAGGA GTACGAGGCG CGACTGGGCG AGCCGCTGTC TGCCGAGCAG ACCGCGCGGG CGTGGCGCAC AGCGCTCGAC CCGGAAGGCG AGTGGATGCC GGCGGTGATC ACGGCGGCCG ATCGACGGCT CCGACAACTG CGTGCGCACG TACCCGACGC GGGCGGCATG ATCATCGCCT CGGATCGCAC CACGGCCCGC GCTTATGCCC GCCTGCTCAC CACGATGACG GCCGAAGAGC CCACGGTCGT GCTCTCCGAC GACCCCGGAT CGTCGGCGCG TATCACGGAA TTTGCCCAGG GCACCAGCCG TTGGCTGGTC GCGGTCCGCA TGGTCTCCGA AGGTGTCGAC GTGCCCCGGC TTTCGGTCGG GGTTTACGCC ACCAACGCCT CCACGCCGCT GTTCTTCGCA CAGGCCATCG GTCGGTTCGT GAGGTCCCGC CGACCGGGTG AAACCGCGAG CATCTTCGTG CCGTCGGTGC CTAACCTGCT GCAGCTGGCC AGTGCGTTGG AGGTGCAGCG TAACCACGTG CTGGGCCGAC CGCACCGCGA ATCGGCCCAC GATCCCCTCG ATGGTGATCC CGCCACCAGG ACGCAAACCG AGCGGGGCGG CGCGGAGCGG GGCTTTACCG CGTTGGGGGC CGATGCGGAA CTCGATCAGG TCATCTTCGA CGGTTCCTCG TTCGGCACCG CCACCCCAAC CGGGAGCGAC GAGGAGGCCG ACTACCTAGG CATCCCCGGG CTGCTCGATG CCGAGCAGAT GCGCGCCCTG CTGCACCGCC GCCAAGACGA GCAGCTGAGG AAACGGGCTC AGCTTCAGAA AGGGGCCACC CAGCCAGCAA CGTCGGGGGC TTCGGCATCG GTGCATGGCC AACTGCGCGA CCTGCGCCGC GAGCTCCACA CGCTGGTGTC GATTGCGCAC CACCGCACCG GCAAACCGCA TGGCTGGATC CACGACGAAC TGCGCCGCCG TTGTGGCGGG CCTCCGATCG CCGCTGCCAC CCGCGCTCAG ATCAAGGCAC GCATCGATGC GTTGCGACAG CTCAACTCCG AGCGGTCATG A
|
Protein sequence | MRVTRLVDAE STRCDVGPAP KSVAMLHFTA ATSRFRLGRE RANSVRSDGG WGVLQPVSAT FNPPLRGWQR RALVQYLGTQ PRDFLAVATP GSGKTSFALR IAAELLRYHT VEQVTVVVPT EHLKVQWAHA AAAHGLSLDP KFANSNPQTS PEYHGVMVTY AQVASHPTLH RVRTEARKTL VVFDEIHHGG DAKTWGDAIR EAFGDATRRL ALTGTPFRSD DSPIPFVSYQ PDADGVLRSQ ADHTYGYAEA LADGVVRPVV FLAYSGQARW RDSAGEEYEA RLGEPLSAEQ TARAWRTALD PEGEWMPAVI TAADRRLRQL RAHVPDAGGM IIASDRTTAR AYARLLTTMT AEEPTVVLSD DPGSSARITE FAQGTSRWLV AVRMVSEGVD VPRLSVGVYA TNASTPLFFA QAIGRFVRSR RPGETASIFV PSVPNLLQLA SALEVQRNHV LGRPHRESAH DPLDGDPATR TQTERGGAER GFTALGADAE LDQVIFDGSS FGTATPTGSD EEADYLGIPG LLDAEQMRAL LHRRQDEQLR KRAQLQKGAT QPATSGASAS VHGQLRDLRR ELHTLVSIAH HRTGKPHGWI HDELRRRCGG PPIAAATRAQ IKARIDALRQ LNSERS
|
| |