Gene TBFG_12559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12559 
SymbolaroK 
ID5223241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2875991 
End bp2876521 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content73% 
IMG OID640607321 
Productshikimate kinase 
Protein accessionYP_001288488 
Protein GI148823734 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones279 
Plasmid unclonability p-value0.0000000121488 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones193 
Fosmid unclonability p-value0.108726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCA AAGCGGTTCT CGTCGGCCTG CCGGGCTCCG GCAAGTCCAC CATCGGGCGC 
CGGCTGGCCA AGGCGCTCGG GGTCGGCCTG CTCGACACCG ACGTCGCGAT CGAGCAGCGG
ACCGGACGCA GCATCGCCGA CATCTTCGCC ACCGACGGGG AGCAGGAGTT CCGACGTATC
GAGGAGGACG TGGTGCGCGC GGCACTGGCC GACCACGACG GTGTGCTGTC GCTCGGCGGC
GGCGCGGTGA CCAGCCCCGG TGTGCGCGCG GCGCTGGCCG GCCACACCGT CGTCTACCTG
GAGATCAGCG CCGCCGAGGG CGTGCGCCGC ACCGGCGGCA ACACCGTGCG CCCACTGCTG
GCCGGCCCCG ACCGCGCCGA AAAATACCGC GCGCTGATGG CCAAGCGGGC ACCGCTGTAC
CGGCGCGTCG CGACCATGCG AGTGGACACC AATCGCCGCA ACCCCGGGGC GGTGGTCCGC
CATATCCTGT CGCGGCTGCA GGTTCCCAGC CCCAGCGAGG CGGCCACATG A
 
Protein sequence
MAPKAVLVGL PGSGKSTIGR RLAKALGVGL LDTDVAIEQR TGRSIADIFA TDGEQEFRRI 
EEDVVRAALA DHDGVLSLGG GAVTSPGVRA ALAGHTVVYL EISAAEGVRR TGGNTVRPLL
AGPDRAEKYR ALMAKRAPLY RRVATMRVDT NRRNPGAVVR HILSRLQVPS PSEAAT