Gene TBFG_12548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12548 
Symbol 
ID5223230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2865069 
End bp2865989 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID640607310 
Productrestriction system protein mrr 
Protein accessionYP_001288477 
Protein GI148823723 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones410 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones176 
Fosmid unclonability p-value0.00923915 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGATCC CTGATGCCCA GACGTTGATG CGGCCGATTC TCGCGTATCT TGCCGATGGA 
CAAGCGAAGT CGGCCAAGGA CGTCATCGCG GCGATGTCCG ACGAGTTCGG TCTGTCCGAC
GACGAGCGGG CGCAGATGTT GCCCAGCGGT CGGCAAAGGA CCATGTACGA CAGGGTGCAC
TGGTCTCTCA CTCACATGTC GCAGGCCGGA TTGCTCGACC GTCCCACGCG GGGCCACGTC
CAGGTCACGG ACACGGGCCG TCAAGTCCTG AAGGCGCATC CCGAGCGCGT CGACATGGCT
GTGCTGCGGG AGTTCCCGTC GTACATCGCT TTTCGTGAGC GAACCAAAGC CAAGCAGCCA
GTCGACGCGA CCGCCAAGCG ACCGTCCGGG GACGATGTGC AGGTCTCACC CGAGGATCTC
ATCGACGCTG CGCTTGCGGA GAACCGGGCA GCCGTCGAGG GGGAGATCCT GAAGAAGGCA
CTCACGTTGT CGCCCACCGG GTTTGAAGAT CTGGTTATCA GACTTTTGGA GGCGATGGGT
TACGGGCGAG CCGGCGCGGT GGAACGGACG AGTGCCTCCG GTGACGCTGG CATCGACGGA
ATCATCAGCC AGGACCCGCT CGGGCTGGAC CGCATCTACG TGCAGGCCAA GCGATACGCC
GTCGACCAAA CGATTGGCCG GCCGAAGATC CACGAGTTCG CCGGCGCCCT CCTGGGCAAG
CAGGGCGACC GGGGCGTCTA CATCACCACG TCATCGTTTT CCCGCGGTGC CCGCGAGGAA
GCTGAGCGGA TCAACGCCCG GATCGAACTC ATCGACGGCG CTCGGCTGGC CGAGCTGCTC
GTGCGGTATC GAGTCGGTGT CCAGGCGGTG CAGACCGTCG AACTCTTACG GCTCGACGAG
GACTTTTTTG ATGGCCTGTA A
 
Protein sequence
MTIPDAQTLM RPILAYLADG QAKSAKDVIA AMSDEFGLSD DERAQMLPSG RQRTMYDRVH 
WSLTHMSQAG LLDRPTRGHV QVTDTGRQVL KAHPERVDMA VLREFPSYIA FRERTKAKQP
VDATAKRPSG DDVQVSPEDL IDAALAENRA AVEGEILKKA LTLSPTGFED LVIRLLEAMG
YGRAGAVERT SASGDAGIDG IISQDPLGLD RIYVQAKRYA VDQTIGRPKI HEFAGALLGK
QGDRGVYITT SSFSRGAREE AERINARIEL IDGARLAELL VRYRVGVQAV QTVELLRLDE
DFFDGL