Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12525 |
Symbol | |
ID | 5223205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2831789 |
End bp | 2832445 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640607285 |
Product | succinyl-CoA:3-ketoacid-coenzyme A transferase beta subunit scoB |
Protein accession | YP_001288454 |
Protein GI | 148823700 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 354 |
Plasmid unclonability p-value | 0.288021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 186 |
Fosmid unclonability p-value | 0.0468104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC CGGGCTGGAG CCGAGACGAG ATGGCCGCAC GGGTGGCCGC GGAGTTCGAA GACGGTCAGT ATGTCAACCT TGGCATCGGC ATGCCCACCC TGATTCCCAA CCACATTCCC GACGGCGTCC ATGTCGTCCT GCACTCGGAG AACGGCATCC TCGGCGTCGG CCCCTACCCG CGGCGGGAGG ACGTGGATGC CGATTTGATC AACGCGGGCA AGGAGACGGT CACCACGCTG CCGGGTGCCG CATTCTTCAG CTCGTCGACT TCGTTCGGAA TCATCCGCGG CGGCCACCTT GATGTCGCAG TGCTTGGCGC GATGCAGGTT TCGGTCACCG GTGACCTAGC CAACTGGATG ATCCCCGGCA AGATGGTCAA GGGCATGGGC GGCGCGATGG ATCTGGTACA CGGCGCTCGC AAGGTGATCG TGATGATGGA GCACACCGCC AAGGACGGTA GCCCCAAGAT CCTAGAGCGG TGCACATTGC CGTTGACCGG TGTGGGCTGC GTCGACCGCA TTGTCACTGA ACTCGCGGTC ATCGATGTCT GCGCTGACGG CCTGCACCTG GTCCAGACCG CTCCTGGCGT GTCGGTCGAC GAGGTAGTCG CGAAGACTCA ACCGCCCCTT GTGCTTCGGG ACCTGGCGAC CCAGTGA
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Protein sequence | MSAPGWSRDE MAARVAAEFE DGQYVNLGIG MPTLIPNHIP DGVHVVLHSE NGILGVGPYP RREDVDADLI NAGKETVTTL PGAAFFSSST SFGIIRGGHL DVAVLGAMQV SVTGDLANWM IPGKMVKGMG GAMDLVHGAR KVIVMMEHTA KDGSPKILER CTLPLTGVGC VDRIVTELAV IDVCADGLHL VQTAPGVSVD EVVAKTQPPL VLRDLATQ
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