Gene TBFG_12109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12109 
Symbol 
ID5222784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2344826 
End bp2345575 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID640606864 
Productshort-chain type dehydrogenase 
Protein accessionYP_001288042 
Protein GI148823288 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones334 
Plasmid unclonability p-value0.0969854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones211 
Fosmid unclonability p-value0.809118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACA CGGGCGCTGC TCCGGTAGTA ATTTTCGGCG GCCGCAGCCA GATCGGCGGC 
GAACTCGCGC GACGCCTGGC TGCCGGGGCG ACGATGGTGC TGGCCGCGCG GAACGCCGAT
CAACTCGCCG ACCAGGCCGC CGCACTCCGC GCAGCTGGCG CTATAGCGGT GCACACCCGG
GAGTTCGACG CCGACGACCT GGCCGCACAC GGCCCGTTGG TCGCTTCGCT CGTTGCCGAG
CACGGCCCCA TCGGCACCGC GGTGCTGGCC TTCGGGATAC TCGGCGACCA GGCCCGCGCC
GAGACAGACG CGGCGCACGC GGTGGCCATC GTGCACACCG ACTACGTCGC CCAGGTCAGC
CTGCTGACTC ATCTGGCAGC GGCGATGCGC ACCGCCGGAC GGGGATCGCT GGTGGTGTTC
TCCTCGGTCG CCGGGATTCG GGTGCGCCGC GCCAACTATG TCTACGGATC GGCCAAAGCC
GGCCTGGACG GCTTCGCCAG CGGCCTGGCC GATGCGTTGC ACGGCACCGG GGTGCGGTTA
CTGATCGCGC GGCCGGGATT CGTCATCGGG CGCATGACCG AGGGCATGAC GCCCGCACCC
CTGTCGGTCA CCCCGGAGCG GGTGGCCGCC GCGACCGCGC GTGCGCTGGT CAACGGTAAG
CGCGTGGTGT GGATTCCGTG GGCGCTGCGG CCAATGTTTG TTGCGCTGCG GTTGCTTCCC
CGGTTCGTCT GGCGCAGGAT GCCGCGATGA
 
Protein sequence
MDDTGAAPVV IFGGRSQIGG ELARRLAAGA TMVLAARNAD QLADQAAALR AAGAIAVHTR 
EFDADDLAAH GPLVASLVAE HGPIGTAVLA FGILGDQARA ETDAAHAVAI VHTDYVAQVS
LLTHLAAAMR TAGRGSLVVF SSVAGIRVRR ANYVYGSAKA GLDGFASGLA DALHGTGVRL
LIARPGFVIG RMTEGMTPAP LSVTPERVAA ATARALVNGK RVVWIPWALR PMFVALRLLP
RFVWRRMPR