Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11203 |
Symbol | |
ID | 5221880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1313128 |
End bp | 1314216 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640605957 |
Product | N-succinyldiaminopimelate aminotransferase |
Protein accession | YP_001287148 |
Protein GI | 148822394 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 324 |
Plasmid unclonability p-value | 0.3866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 274 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGCGT CTCTGCCCGT CTTCCCCTGG GACACCTTGG CCGACGCGAA AGCGCTGGCC GGGGCCCATC CGGATGGCAT CGTCGACCTC TCCGTCGGCA CTCCGGTCGA CCCGGTCGCA CCGCTGATCC AGGAGGCGCT GGCGGCGGCC AGTGCCGCCC CTGGCTATCC GGCGACCGCC GGCACCGCAC GGTTACGTGA GTCTGTGGTG GCAGCGCTGG CTCGCCGCTA CGGCATCACC AGGCTGACCG AGGCGGCCGT GTTGCCGGTT ATCGGCACCA AGGAACTCAT CGCCTGGTTG CCGACGTTGT TGGGCCTGGG CGGTGCGGAT CTGGTCGTCG TGCCCGAATT GGCATATCCG ACTTATGACG TCGGCGCCCG CCTGGCCGGA ACGCGGGTGC TGCGTGCGGA TGCGCTGACC CAGCTGGGTC CGCAATCCCC GGCACTGCTC TACCTGAACT CGCCGAGCAA CCCGACCGGA CGGGTGCTGG GTGTCGACCA TTTGCGCAAG GTGGTCGAGT GGGCCCGGGG CAGAGGCGTT CTCGTGGTTT CCGACGAGTG CTACCTGGGA TTGGGCTGGG ACGCCGAACC GGTTTCGGTG CTACATCCCT CGGTGTGCGA CGGCGACCAC ACCGGGTTGC TGGCTGTGCA CTCACTATCG AAGAGCTCAT CGCTCGCCGG CTACCGAGCG GGTTTCGTCG TCGGTGACCT CGAGATCGTT GCCGAGCTAC TAGCGGTGCG CAAACACGCC GGGATGATGG TGCCGGCGCC GGTACAGGCG GCTATGGTGG CCGCGCTGGA CGACGACGCG CACGAAAGGC AACAGCGGGA GCGCTACGCA CAACGGCGTG CCGCGCTGTT GCCGGCGCTG GGCTCCGCGG GTTTTGCGGT CGACTATTCG GACGCCGGAT TGTATCTATG GGCCACTCGC GGCGAGCCGT GCCGCGACAG TGCCGCGTGG CTGGCGCAGC GGGGCATCCT GGTGGCACCG GGTGATTTCT ACGGCCCGGG TGGGGCTCAG CACGTGCGGG TGGCGCTGAC GGCCACCGAC GAGCGGGTTG CGGCGGCGGT CGGACGGCTC ACCTGTTAG
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Protein sequence | MSASLPVFPW DTLADAKALA GAHPDGIVDL SVGTPVDPVA PLIQEALAAA SAAPGYPATA GTARLRESVV AALARRYGIT RLTEAAVLPV IGTKELIAWL PTLLGLGGAD LVVVPELAYP TYDVGARLAG TRVLRADALT QLGPQSPALL YLNSPSNPTG RVLGVDHLRK VVEWARGRGV LVVSDECYLG LGWDAEPVSV LHPSVCDGDH TGLLAVHSLS KSSSLAGYRA GFVVGDLEIV AELLAVRKHA GMMVPAPVQA AMVAALDDDA HERQQRERYA QRRAALLPAL GSAGFAVDYS DAGLYLWATR GEPCRDSAAW LAQRGILVAP GDFYGPGGAQ HVRVALTATD ERVAAAVGRL TC
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