| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11004 |
|---|
| Symbol | |
|---|
| ID | 5221678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 1105604 |
|---|
| End bp | 1106317 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640605755 |
|---|
| Product | adhesion ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001286949 |
|---|
| Protein GI | 148822195 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 110 |
|---|
| Plasmid unclonability p-value | 6.7798e-57 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 203 |
|---|
| Fosmid unclonability p-value | 0.515996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCTGGA CATTCCGAGA AGGCGAAACC CGACGACAAG TCCTAGACCA CATCACCTTC
GATTTCGAGC CCGGTGAGTT TGTCGCGCTG CTGGGGCAAA GTGGAAGTGG TAAAAGCACT
TTGCTGAACC TCATCAGTGG CATAGAAAAG CCCACCACAG GTGACGTCAC AATTAATGGG
TTCGCTATCA CTCAGAAAAC CGAGCGAGAC CGGACGTTGT TCCGGCGCGA TCAGATTGGC
ATCGTCTTTC AATTTTTCAA CCTGATTCCC ACTCTTACCG TGTTGGAAAA TATTACGCTG
CCTCAGGAAC TGGCCGGAGT TTCTCAGAGG AAAGCGGCCG TGGTCGCTCG TGACCTTCTC
GAAAAAGTGG GCATGGCCGA CCGTGAACGC ACCTTTCCCG ATAAACTCTC CGGCGGAGAA
CAACAACGGG TCGCTATTTC CAGAGCGTTG GCGCATAATC CCATGCTGGT GTTAGCCGAT
GAGCCGACCG GCAACCTGGA CTCCGATACC GGGGATAAAG TCTTGGATGT TCTGCTTGAT
CTCACCCGCC AAGCAGGTAA AACCTTAATC ATGGCTACGC ATAGCCCGTC GATGACGCAG
CATGCCGACC GGGTAGTCAA CTTACAGGGC GGCAGGTTGA TACCTGCCGT GAACCGAGAA
AATCAAACCG ACCAGCCGGC CAGCACGATC CTATTGCCCA CGTCATATGA ATGA
|
|---|
| Protein sequence | MSWTFREGET RRQVLDHITF DFEPGEFVAL LGQSGSGKST LLNLISGIEK PTTGDVTING
FAITQKTERD RTLFRRDQIG IVFQFFNLIP TLTVLENITL PQELAGVSQR KAAVVARDLL
EKVGMADRER TFPDKLSGGE QQRVAISRAL AHNPMLVLAD EPTGNLDSDT GDKVLDVLLD
LTRQAGKTLI MATHSPSMTQ HADRVVNLQG GRLIPAVNRE NQTDQPASTI LLPTSYE
|
|---|
| |