| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10998 |
|---|
| Symbol | |
|---|
| ID | 5221672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1098847 |
|---|
| End bp | 1100220 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640605749 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_001286943 |
|---|
| Protein GI | 148822189 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 211 |
|---|
| Plasmid unclonability p-value | 0.00000000104383 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 206 |
|---|
| Fosmid unclonability p-value | 0.995085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTG TCAACGTGGC CCCACAGTTA GTGTCCACAG CCGCGGCCGA TGCAGCGCGG
ATCGGCTCGG CGATCAACAC CGCCAACACC GCGGCGGCGG CGACCACCCA GGTGTTGGCC
GCCGCCCACG ACGAGGTGTC AACGGCGATC GCCGCGCTGT TCGGCAGCCA CGGCCAGCAC
TATCAAGCGA TCAGCGCGCA GGTCGCGGCC TATCAGCAAC GGTTCGTGCT GGCCTTAAGC
CAAGCTGGCA GCACCTACGC GGTCGCCGAA GCGGCCAGCG CAACACCGCT GCAGAACGTG
CTCGATGCGA TCAACGCACC CGTTCAGTCG CTGACCGGGC GCCCATTGAT CGGCGACGGC
GCGAACGGGA TCGACGGGAC CGGGCAAGCC GGCGGTAACG GCGGGTGGCT GTGGGGCAAC
GGCGGCAACG GCGGGTCGGG GGCACCCGGG CAGGCCGGCG GGGCCGGCGG TGCGGCCGGG
TTGATCGGCA ACGGTGGGGC CGGCGGAGCT GGCGGCCAGG GCCTACCCTT TGAGGCCGGC
GCGAACGGCG GAGCCGGCGG CGCCGGTGGA TGGCTGTTCG GCAACGGCGG GGCCGGTGGT
GTCGGCGGGG CCGGCGGAGC CGGCACAACC TTCGGTGTGG CCGGCGGTGA CGGTGGCACC
GGCGGGGTTG GTGGTCACGG CGGGTTAATC GGTGTGGGTG GACACGGCGG GGACGGCGGG
ACCGGCGGCA CCGGCGGCGC GGTCAGCCTC GCCCGCGCCG GCACGGCCGG CGGTGCCGGC
GGCGGCCCGG TCGGCGGTAT CGGCGGTGCG GGTGGGGTCG GCGGTGCCGG TGGGGCCGCC
GGCGCCGTCA CCACCATCAC CCACGCCAGC TTCAACGATC CGCACGGGGT GGCGGTCAAC
CCGGGCGGCA ACATCTACGT CACCAACCAG GGCAGCAACA CGGTGTCGGT GATCGACCCG
GTCACCAACA CCGTCACCGG CTCCATCACC GACGGCAACG GTCCAAGCGG GGTGGCGGTC
AGCCCCGTCA CCGGCCTGGT CTTCGTGACC AACTTCGACA GCAACACGGT GTCGGTGATC
GACCCGAACA CCAACACCGT CACCGGCTCC ATCCCCGTCG GTACCGGTGC GTATGGGGTG
GCGGTCAACC CAGGCGGCAA CATCTACGTC ACCAACCAGT TCAGCAACAC GGTGTCGGTG
ATCGACCCGG CCACCAACAC CGTCACCGGC TCCCCCATCC CCGTCGGACT CGACCCGACA
GGGGTGGCGG TCAACCCCGT CACCGGCGTG GTCTACGTCA CTAACTCTCT CGACGACACG
GTGTCGGTGA TCACCGGAGA GCCGGCGCGC TCGGTGTGTT CGGCGGCCAT ATGA
|
|---|
| Protein sequence | MSFVNVAPQL VSTAAADAAR IGSAINTANT AAAATTQVLA AAHDEVSTAI AALFGSHGQH
YQAISAQVAA YQQRFVLALS QAGSTYAVAE AASATPLQNV LDAINAPVQS LTGRPLIGDG
ANGIDGTGQA GGNGGWLWGN GGNGGSGAPG QAGGAGGAAG LIGNGGAGGA GGQGLPFEAG
ANGGAGGAGG WLFGNGGAGG VGGAGGAGTT FGVAGGDGGT GGVGGHGGLI GVGGHGGDGG
TGGTGGAVSL ARAGTAGGAG GGPVGGIGGA GGVGGAGGAA GAVTTITHAS FNDPHGVAVN
PGGNIYVTNQ GSNTVSVIDP VTNTVTGSIT DGNGPSGVAV SPVTGLVFVT NFDSNTVSVI
DPNTNTVTGS IPVGTGAYGV AVNPGGNIYV TNQFSNTVSV IDPATNTVTG SPIPVGLDPT
GVAVNPVTGV VYVTNSLDDT VSVITGEPAR SVCSAAI
|
|---|
| |