Gene Synpcc7942_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2598 
Symbol 
ID3775195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2680410 
End bp2681486 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content57% 
IMG OID637801052 
Producthypothetical protein 
Protein accessionYP_401615 
Protein GI81301407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC GTCCTCATCT CTATGTTGCG ATTACCAATC ATGGGTTTGG CCATGCAACC 
CGGACCGCTG CAGTCCTGGC TGAATTGCAT CGCTTGCGAC CCGATGTGCG GTTCACCGTT
GCGACCCAAG CGCCCCGTTG GTTGTTGGCC TCCTACTTCG GCGGTGACTT TGAGCAACGA
CCGGTGGCTC TTGATGTGGG AGTTGTCCAG TCCGATAGTC TACAGATCGA TCGCACGGCG
ACTTGGGAGC GGTTGCAGCA CCTTCAAGCC CAGCAGGATA GCTTGATTGA GCAAGAGGCT
GCCTATCTTC AACAAGAGCA AGTGCAGTTA GTTCTGGCTG ATATCCCACC CCTAGCGATC
GCGATCGCAG CCAAAGCGCA GCTGCCCTGC TGGATGATGG GGAACTTTGG CTGGGATTTT
ATCTACGCTG ATTGGGGGCA CCCATTTGTC GAAATAGTCG ACTGGATTCG ACATCTCTAC
AAGGATTGCG ATCGCCTGTT CCGCCTGCCC TTCCATGAGC CAATGCAGAG TTTCCCAGTG
CAGGAAGCCG TGGGCCTGAC TGGAGGATCG CCCCAGTTTT CCGACTGGGA TCTGCGCCAG
CGTTTTGATC TCAGTGCTGA TGCCAAGACT GTCCTGCTCA CCTTTGGCGG CTTGGGCTTG
CAGCAGTTTC CCTACGATAC TCTGCAGGCC TTTCCCGACT GGCAGTTTCT CAGTTTCGAT
CGCCAGGCAC CGGATCTTCC CAATCTACGG ACGATCCGCG ATCCGATCTA CCGTCCGGTT
GACTTCATGC CGATCTGCGA CTGGGTTTTT TGCAAGCCGG GCTATGGCAC CTTTTCAGAA
GCCTGTCGGG TTCAAGCCCC GATCGCCTCT CTGACGCGAA CCGGCTTCGC CGAGGCAGAA
CTTTTGCTGC AGAGCTTGCA GACGATCGCC CCCCACGCCA TTCTCAGCCC TGAAGCTTGC
GTTGCCGGTG ACTGGTCTGT GCTTAAGGAG CCTCCCCAGC CACCACTGCA GGAGTTGCCT
TGGTACCGAG ATGGCAACCG TCAAATTGCC GAAGCGATTG CCGAAGCCCT GAACTAG
 
Protein sequence
MQQRPHLYVA ITNHGFGHAT RTAAVLAELH RLRPDVRFTV ATQAPRWLLA SYFGGDFEQR 
PVALDVGVVQ SDSLQIDRTA TWERLQHLQA QQDSLIEQEA AYLQQEQVQL VLADIPPLAI
AIAAKAQLPC WMMGNFGWDF IYADWGHPFV EIVDWIRHLY KDCDRLFRLP FHEPMQSFPV
QEAVGLTGGS PQFSDWDLRQ RFDLSADAKT VLLTFGGLGL QQFPYDTLQA FPDWQFLSFD
RQAPDLPNLR TIRDPIYRPV DFMPICDWVF CKPGYGTFSE ACRVQAPIAS LTRTGFAEAE
LLLQSLQTIA PHAILSPEAC VAGDWSVLKE PPQPPLQELP WYRDGNRQIA EAIAEALN