| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2473 |
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| Symbol | |
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| ID | 3774493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2555003 |
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| End bp | 2556391 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800922 |
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| Product | serine phosphatase |
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| Protein accession | YP_401490 |
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| Protein GI | 81301282 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000579544 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACGC TCCCCTATTT CCAACCCGCG GCTTCGCCGG CTTCGGCGGG GGAAGGTTCA
GCTAGCCTTT CACCAGTCAT TGCCCTCAAG GATCTGGTCG CGCGCCTCGA TCGCGAACAG
CGCAAAGCTC AGGAATTGTT GGCCTCCCTA GGGTTCGCGC TCCGCAGCTT CACCAATTTG
GGCCAGTTCC TAGAACTGAT CCCACTCATT GCCAGTCGAG TCACCGACAC TGAAGGCAGT
CTGTTATTGA CCTTTCGGCC CGACGGTCGC TTTTGGCAGG CGCAACTACA CTGCACTGAT
CCCCGCCTTG CGGAGACCCT GAATCGAATT CCCGCAAGCT TGCCGGTTGG GACGGCTCCC
AGTGGTTCCC CAACGGAAGC AATCGCTGAG ATCGATCGCC AAGTGCAACG CTGTCTAGGC
CGCAACGCGC AGTTATTTGC CACCGCCGTT TTGGTGCGGA ACCAAGCCCG TGGACGGCTG
TACGTCTTCA GCTTAGATGG CCAGTACAGC TGGAATGAAT CGCGTCAAAA ACTGGTTCGC
TTAGTGGCGG ATCAAACTGC TGTTGCGATA GAAAATGATG CGCTGACCAC CGAGCTACGC
CAAAAAGAAC GCCTCGATCG CGAATTAGAA ATTGGTGCTG AAATTCAGTT GCAATTACTG
CCGAGTCAGT GCCCGGCGAT TGAAGGCTTA GAAATTGCGG CGGCCTGTCG AACAGCGAGC
CGCGTGGGCG GGGATTACTA CGACTTCATT CCTACCCGCA CCCACAGCGA TGAACAGGGA
CGCTTGCAGC CCGATGCAGG CTCGCCCTGG GCGATCGCAA TCGGCGACAT CATGGGCAAA
GGCGTCCCCG CTGGCTTGAT CATGACGATG CTGCGCGGCA TGCTGCGGGC AGAGGTGCTG
AACCGGCACC GGCCCAGTCG GGTCTTGGCA CACCTCAATC AGGTGATCTA CGCGGACCTC
GAGCATTCCA ATCGCTTCGC CACGCTGTTT TACTCGGAAT ACGATCCCAG CTCGCGCTTG
CTGACCTTTA GCAATGCGGC CCACAATCCA CCCCTGCTCT GGCAACAGGC AACGGGCACC
CTCAAGCGCC TCGACACCTT TGGCATGATG ATTGGCCTCG AAGCCGATAA TGCCTACGCC
GAACAGCACG TGCAGCTTCA GCCGGGCGAT GTGGTTCTCT ACTACACCGA TGGTTTGACC
GATGCGGCTG ATCCGCGGGG TAACCGCTTC GATGAGGAGA ACGTCGCGAT CGCCTTCCGT
GAGGCTTGCC GGCGACGACT GTCAGCAGAA GCCCTCCTAG CCGACCTATT CAACCGAGTC
CAGCGCTTCA TTGGGCCCGA TCGCCACAAT GAAGATGACA TGACCCTCGT AGTCCTGCGG
GCCGTTTGA
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| Protein sequence | MTTLPYFQPA ASPASAGEGS ASLSPVIALK DLVARLDREQ RKAQELLASL GFALRSFTNL
GQFLELIPLI ASRVTDTEGS LLLTFRPDGR FWQAQLHCTD PRLAETLNRI PASLPVGTAP
SGSPTEAIAE IDRQVQRCLG RNAQLFATAV LVRNQARGRL YVFSLDGQYS WNESRQKLVR
LVADQTAVAI ENDALTTELR QKERLDRELE IGAEIQLQLL PSQCPAIEGL EIAAACRTAS
RVGGDYYDFI PTRTHSDEQG RLQPDAGSPW AIAIGDIMGK GVPAGLIMTM LRGMLRAEVL
NRHRPSRVLA HLNQVIYADL EHSNRFATLF YSEYDPSSRL LTFSNAAHNP PLLWQQATGT
LKRLDTFGMM IGLEADNAYA EQHVQLQPGD VVLYYTDGLT DAADPRGNRF DEENVAIAFR
EACRRRLSAE ALLADLFNRV QRFIGPDRHN EDDMTLVVLR AV
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